RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 VARSP26640 1264 aaKnown RBP15.87■□□□□ 0.13
PMF1-206ENST00000606952 GSTM2P28161 218 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 ARL1P40616 181 aaPredicted RBP15.87■□□□□ 0.13
PMF1-206ENST00000606952 CAPZBP47756 277 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 YBX1P67809 324 aaKnown RBP15.87■□□□□ 0.13
PMF1-206ENST00000606952 IRX1P78414 480 aaPredicted RBP15.87■□□□□ 0.13
PMF1-206ENST00000606952 CSTF3Q12996 717 aaKnown RBP15.87■□□□□ 0.13
PMF1-206ENST00000606952 TSTA3Q13630 321 aaPredicted RBP15.87■□□□□ 0.13
PMF1-206ENST00000606952 CPSF6Q16630 551 aaKnown RBP eCLIP15.87■□□□□ 0.13
PMF1-206ENST00000606952 SMU1Q2TAY7 513 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 FAM219BQ5XKK7 198 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 MED27Q6P2C8 311 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 SPESP1Q6UW49 350 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 PAQR7Q86WK9 346 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 GATAD2AQ86YP4 633 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 CARFQ8N187 725 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 KRT78Q8N1N4 520 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 MINDY1Q8N5J2 469 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 GBP7Q8N8V2 638 aaPredicted RBP15.87■□□□□ 0.13
PMF1-206ENST00000606952 OR7G3Q8NG95 312 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 CEP70Q8NHQ1 597 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 C3orf30Q96M34 536 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 AIF1LQ9BQI0 150 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 ACAT2Q9BWD1 397 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 TBC1D10AQ9BXI6 508 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 SPNS1Q9H2V7 528 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 BRF2Q9HAW0 419 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 TCF7L2Q9NQB0 619 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 ADGRE2Q9UHX3 823 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 ZNF490Q9ULM2 529 aaPredicted RBP15.87■□□□□ 0.13
PMF1-206ENST00000606952 SNX7Q9UNH6 387 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 FIS1Q9Y3D6 152 aa15.87■□□□□ 0.13
PMF1-206ENST00000606952 USP34Q70CQ2 3546 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 VPS13AQ96RL7 3174 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 TRBC2A0A5B9 178 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 LNP1A1A4G5 178 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 OR2A25A4D2G3 310 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 ISM1B1AKI9 464 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 SLC28A1O00337 649 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 FOXE1O00358 373 aaPredicted RBP15.86■□□□□ 0.13
PMF1-206ENST00000606952 FFAR3O14843 346 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 GPR42O15529 346 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 DCTN3O75935 186 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 PROS1P07225 676 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 POLR2CP19387 275 aaPredicted RBP15.86■□□□□ 0.13
PMF1-206ENST00000606952 EPHA3P29320 983 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 NBL1P41271 181 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 GRIA3P42263 894 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 PIK3CBP42338 1070 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 MRPL19P49406 292 aaKnown RBP15.86■□□□□ 0.13
PMF1-206ENST00000606952 IFT88Q13099 833 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 SQSTM1Q13501 440 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 ABRAXAS2Q15018 415 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 HIST2H2ACQ16777 129 aaPredicted RBP15.86■□□□□ 0.13
PMF1-206ENST00000606952 PROX2Q3B8N5 592 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 LSM12Q3MHD2 195 aaKnown RBP15.86■□□□□ 0.13
PMF1-206ENST00000606952 KIAA1614Q5VZ46 1190 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 FAM91A1Q658Y4 838 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 HIST2H2AA3Q6FI13 130 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 Q6ZSR9 355 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 ACAD11Q709F0 780 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 CHSY3Q70JA7 882 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 OR2T11Q8NH01 316 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 SELENOMQ8WWX9 145 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 RSC1A1Q92681 617 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 PRR11Q96HE9 360 aaPredicted RBP15.86■□□□□ 0.13
PMF1-206ENST00000606952 METTL2AQ96IZ6 378 aaKnown RBP15.86■□□□□ 0.13
PMF1-206ENST00000606952 APOLD1Q96LR9 279 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 OR52B2Q96RD2 323 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 CD180Q99467 661 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 SLC38A3Q99624 504 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 MYLK2Q9H1R3 596 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 ELOVL6Q9H5J4 265 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 RIC8BQ9NVN3 520 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 HRASLS2Q9NWW9 162 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 LRIT1Q9P2V4 623 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 GMEB2Q9UKD1 530 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 PADI4Q9UM07 663 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 BTRCQ9Y297 605 aa15.86■□□□□ 0.13
PMF1-206ENST00000606952 MDC1Q14676 2089 aaKnown RBP15.85■□□□□ 0.13
PMF1-206ENST00000606952 A0A0J9YY10 115 aa15.85■□□□□ 0.13
PMF1-206ENST00000606952 EME2A4GXA9 379 aaPredicted RBP15.85■□□□□ 0.13
PMF1-206ENST00000606952 RHPN2P1A8MT19 583 aa15.85■□□□□ 0.13
PMF1-206ENST00000606952 SIGLEC6O43699 453 aa15.85■□□□□ 0.13
PMF1-206ENST00000606952 RSL1D1O76021 490 aaKnown RBP15.85■□□□□ 0.13
PMF1-206ENST00000606952 PDYNP01213 254 aa15.85■□□□□ 0.13
PMF1-206ENST00000606952 SERPINA6P08185 405 aa15.85■□□□□ 0.13
PMF1-206ENST00000606952 SCTRP47872 440 aa15.85■□□□□ 0.13
PMF1-206ENST00000606952 GPLD1P80108 840 aa15.85■□□□□ 0.13
PMF1-206ENST00000606952 NR0B2Q15466 257 aa15.85■□□□□ 0.13
PMF1-206ENST00000606952 SF1Q15637 639 aaKnown RBP15.85■□□□□ 0.13
PMF1-206ENST00000606952 SPDYAQ5MJ70 313 aa15.85■□□□□ 0.13
PMF1-206ENST00000606952 C6orf89Q6UWU4 347 aa15.85■□□□□ 0.13
PMF1-206ENST00000606952 TMIGD1Q6UXZ0 262 aa15.85■□□□□ 0.13
PMF1-206ENST00000606952 ZNF761Q86XN6 746 aaPredicted RBP15.85■□□□□ 0.13
PMF1-206ENST00000606952 MYLK4Q86YV6 388 aaPredicted RBP15.85■□□□□ 0.13
PMF1-206ENST00000606952 DDIASQ8IXT1 998 aa15.85■□□□□ 0.13
PMF1-206ENST00000606952 TTLQ8NG68 377 aa15.85■□□□□ 0.13
PMF1-206ENST00000606952 ZUFSPQ96AP4 578 aa15.85■□□□□ 0.13
PMF1-206ENST00000606952 DPH7Q9BTV6 452 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms