RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 ZNF420Q8TAQ5 688 aaPredicted RBP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 SETD7Q8WTS6 366 aaKnown RBP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 YIPF5Q969M3 257 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 EEF2KMTQ96G04 330 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 MAGED4Q96JG8 741 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 PARK7Q99497 189 aaKnown RBP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 MECRQ9BV79 373 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 RTN4RQ9BZR6 473 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 CHST8Q9H2A9 424 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 CPNE5Q9HCH3 593 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 BARHL2Q9NY43 387 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 KCNK4Q9NYG8 393 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 SMARCAL1Q9NZC9 954 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 VPS54Q9P1Q0 977 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 MGAT4CQ9UBM8 478 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 DKK4Q9UBT3 224 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 SLC24A2Q9UI40 661 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 RAB26Q9ULW5 256 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 HEMK1Q9Y5R4 338 aaPredicted RBP4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 A0A1B0GUL6 1792 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 BCORQ6W2J9 1755 aa4.88□□□□□ -1.63
SPTBN1-206ENST00000602898 C4BP0C0L5 1744 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 PNPLA7Q6ZV29 1317 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 K7EQM0 130 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 SCDO00767 359 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 GSC2O15499 205 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 HCRTR2O43614 444 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 SPAG7O75391 227 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 ECI2O75521 394 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 CRCPO75575 148 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 RGS9O75916 674 aaPredicted RBP4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 FGBP02675 491 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 CRYGCP07315 174 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 PLEKP08567 350 aaPredicted RBP4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 SRCP12931 536 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 NPPBP16860 134 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 EGR1P18146 543 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 GABRB1P18505 474 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 NCF2P19878 526 aaPredicted RBP4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 PTENP60484 403 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 YWHAEP62258 255 aaKnown RBP4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 SCGB2A2Q13296 93 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 CTBP1Q13363 440 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 TMEM132BQ14DG7 1078 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF174Q15697 407 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 IQCCQ4KMZ1 466 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 CST9LP1Q5W188 147 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 NCEH1Q6PIU2 408 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 BRAT1Q6PJG6 821 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 TMEM108Q6UXF1 575 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 SLC16A12Q6ZSM3 486 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 LRRC8DQ7L1W4 858 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 RASGRP3Q8IV61 690 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF786Q8N393 782 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 KLHL36Q8N4N3 616 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 OR4D6Q8NGJ1 314 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 RAB3IL1Q8TBN0 382 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 ACTRT1Q8TDG2 376 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 FAM172AQ8WUF8 416 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 EDARADDQ8WWZ3 215 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 FIG4Q92562 907 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 NSMCE2Q96MF7 247 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 KLHL5Q96PQ7 755 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF607Q96SK3 696 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 TINAGL1Q9GZM7 467 aaPredicted RBP4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 POLR1EQ9GZS1 481 aaKnown RBP4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 RIOX1Q9H6W3 641 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 SLAMF7Q9NQ25 335 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 MBNL1Q9NR56 388 aaKnown RBP4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 TM7SF3Q9NS93 570 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 PARVAQ9NVD7 372 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 TAS2R1Q9NYW7 299 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 MTCH1Q9NZJ7 389 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 KCND2Q9NZV8 630 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 EIF3KQ9UBQ5 218 aaKnown RBP4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 MID2Q9UJV3 735 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 TESMINQ9Y4I5 508 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 NAV1Q8NEY1 1877 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 CNTNAP1P78357 1384 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 TCRBV5S4A2TA0A5A2 114 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 SMLR1H3BR10 107 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 TLR4O00206 839 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 SLC22A2O15244 555 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 GRM6O15303 877 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 NRP2O60462 931 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 MAGEC1O60732 1142 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 CCNKO75909 580 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 WDPCPO95876 746 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 B3GALT4O96024 378 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 EPXP11678 715 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 ENO3P13929 434 aaPredicted RBP4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 AREGP15514 252 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 EN2P19622 333 aaPredicted RBP4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 CD72P21854 359 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 POU1F1P28069 291 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 RBL1P28749 1068 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 SERPINA4P29622 427 aa4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 HOXA13P31271 388 aaPredicted RBP4.87□□□□□ -1.63
SPTBN1-206ENST00000602898 FRKP42685 505 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms