RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 KCNMB4Q86W47 210 aa20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 CABS1Q96KC9 395 aa20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 C10orf90Q96M02 699 aa20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 PKP4Q99569 1192 aa20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 GPR21Q99679 349 aa20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 EPS8L2Q9H6S3 715 aa20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 IARS2Q9NSE4 1012 aaKnown RBP20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 KLHL42Q9P2K6 505 aa20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 C3orf18Q9UK00 162 aa20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 FBXO5Q9UKT4 447 aa20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 POLEQ07864 2286 aa20.2■□□□□ 0.82
PPFIA3-209ENST00000602783 DOPEY1Q5JWR5 2465 aa20.19■□□□□ 0.82
PPFIA3-209ENST00000602783 ACPPP15309 386 aa20.19■□□□□ 0.82
PPFIA3-209ENST00000602783 FBLP22087 321 aaKnown RBP20.19■□□□□ 0.82
PPFIA3-209ENST00000602783 DHX9Q08211 1270 aaKnown RBP20.19■□□□□ 0.82
PPFIA3-209ENST00000602783 PRTGQ2VWP7 1150 aa20.19■□□□□ 0.82
PPFIA3-209ENST00000602783 LINC00696Q6ZRV3 163 aa20.19■□□□□ 0.82
PPFIA3-209ENST00000602783 CD200R1Q8TD46 325 aa20.19■□□□□ 0.82
PPFIA3-209ENST00000602783 SLCO2A1Q92959 643 aa20.19■□□□□ 0.82
PPFIA3-209ENST00000602783 C8orf44Q96CB5 159 aa20.19■□□□□ 0.82
PPFIA3-209ENST00000602783 CAPZA3Q96KX2 299 aa20.19■□□□□ 0.82
PPFIA3-209ENST00000602783 C5orf34Q96MH7 638 aa20.19■□□□□ 0.82
PPFIA3-209ENST00000602783 PLCD4Q9BRC7 762 aa20.19■□□□□ 0.82
PPFIA3-209ENST00000602783 YIPF2Q9BWQ6 316 aa20.19■□□□□ 0.82
PPFIA3-209ENST00000602783 ZNF160Q9HCG1 818 aa20.19■□□□□ 0.82
PPFIA3-209ENST00000602783 PCYOX1Q9UHG3 505 aa20.19■□□□□ 0.82
PPFIA3-209ENST00000602783 COMMD10Q9Y6G5 202 aa20.19■□□□□ 0.82
PPFIA3-209ENST00000602783 HEATR5BQ9P2D3 2071 aa20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 MAP2K7O14733 419 aa20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 VPS26AO75436 327 aa20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 HAUS5O94927 633 aa20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 HPP00738 406 aa20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 MPC1LP0DKB6 136 aa20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 ENO3P13929 434 aaPredicted RBP20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 COL8A1P27658 744 aa20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 TSFMP43897 325 aaKnown RBP20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 PNLIPRP1P54315 467 aa20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 CDC16Q13042 620 aa20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 ZNF169Q14929 603 aaPredicted RBP20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 ARHGAP19Q14CB8 494 aa20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 ATG9BQ674R7 924 aa20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 ISLR2Q6UXK2 745 aa20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 MAMDC2Q7Z304 686 aaPredicted RBP20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 LAPTM4BQ86VI4 370 aa20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 PAQR7Q86WK9 346 aa20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 LURAP1LQ8IV03 231 aa20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 CPNE9Q8IYJ1 553 aa20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 PPFIBP2Q8ND30 876 aa20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 AARSD1Q9BTE6 412 aaKnown RBP20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 TAC3Q9UHF0 121 aa20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 CDC14AQ9UNH5 594 aa20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 DHRS7Q9Y394 339 aa20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 CACNA1DQ01668 2161 aa20.18■□□□□ 0.82
PPFIA3-209ENST00000602783 SVILO95425 2214 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 IGLV3-12A0A075B6K2 115 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 IGKV1-8A0A0C4DH67 115 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 ZNF839A8K0R7 811 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 KLHL18O94889 574 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 CLDN1O95832 211 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 SLC16A8O95907 504 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 SYF2O95926 243 aaKnown RBP20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 EMP3P54852 163 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 PRDX1Q06830 199 aaKnown RBP20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 TLR1Q15399 786 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 HKDC1Q2TB90 917 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 MSS51Q4VC12 460 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 ICE2Q659A1 982 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 PIWIL4Q7Z3Z4 852 aaKnown RBP20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 PCGF5Q86SE9 256 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 CSNK1A1LQ8N752 337 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 FBXO15Q8NCQ5 510 aaPredicted RBP20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 C2CD4AQ8NCU7 369 aaPredicted RBP20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 ST6GALNAC3Q8NDV1 305 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 GRHL3Q8TE85 626 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 ZNF480Q8WV37 535 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 ASB11Q8WXH4 323 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 LMF1Q96S06 567 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 SYNPO2LQ9H987 977 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 ABCF3Q9NUQ8 709 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 TRPC4Q9UBN4 977 aa20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 RUVBL1Q9Y265 456 aaKnown RBP20.17■□□□□ 0.82
PPFIA3-209ENST00000602783 FFAR3O14843 346 aa20.16■□□□□ 0.82
PPFIA3-209ENST00000602783 GPR42O15529 346 aa20.16■□□□□ 0.82
PPFIA3-209ENST00000602783 HSD17B2P37059 387 aa20.16■□□□□ 0.82
PPFIA3-209ENST00000602783 EMP2P54851 167 aa20.16■□□□□ 0.82
PPFIA3-209ENST00000602783 GNG11P61952 73 aa20.16■□□□□ 0.82
PPFIA3-209ENST00000602783 MFAP5Q13361 173 aa20.16■□□□□ 0.82
PPFIA3-209ENST00000602783 SPANXN3Q5MJ09 141 aa20.16■□□□□ 0.82
PPFIA3-209ENST00000602783 CATSPER1Q8NEC5 780 aa20.16■□□□□ 0.82
PPFIA3-209ENST00000602783 NDNQ99608 321 aa20.16■□□□□ 0.82
PPFIA3-209ENST00000602783 EBNA1BP2Q99848 306 aaKnown RBP20.16■□□□□ 0.82
PPFIA3-209ENST00000602783 UTP6Q9NYH9 597 aaKnown RBP20.16■□□□□ 0.82
PPFIA3-209ENST00000602783 TRMT6Q9UJA5 497 aaKnown RBP20.16■□□□□ 0.82
PPFIA3-209ENST00000602783 NSG1A0A0A6YYJ2 146 aa20.15■□□□□ 0.82
PPFIA3-209ENST00000602783 IDSB3KWA1 339 aa20.15■□□□□ 0.82
PPFIA3-209ENST00000602783 PRPF4O43172 522 aaKnown RBP eCLIP20.15■□□□□ 0.82
PPFIA3-209ENST00000602783 CCNDBP1O95273 360 aa20.15■□□□□ 0.82
PPFIA3-209ENST00000602783 TTC4O95801 387 aa20.15■□□□□ 0.82
PPFIA3-209ENST00000602783 CXCR2P25025 360 aa20.15■□□□□ 0.82
PPFIA3-209ENST00000602783 IVDP26440 423 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms