RNA–Protein interactions for RNA: ENST00000597088.1

PRKD2-207, Transcript of protein kinase D2, humanhuman

TSL 2

Gene PRKD2, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-207ENST00000597088 VPS11Q9H270 941 aa23.21■■□□□ 1.31
PRKD2-207ENST00000597088 TMEM184CQ9NVA4 438 aa23.21■■□□□ 1.31
PRKD2-207ENST00000597088 SRPK3Q9UPE1 567 aa23.21■■□□□ 1.31
PRKD2-207ENST00000597088 MDC1Q14676 2089 aaKnown RBP23.21■■□□□ 1.31
PRKD2-207ENST00000597088 FER1L5A0AVI2 2057 aa23.2■■□□□ 1.3
PRKD2-207ENST00000597088 TERTO14746 1132 aaKnown RBP23.2■■□□□ 1.3
PRKD2-207ENST00000597088 SRPX2O60687 465 aaPredicted RBP23.2■■□□□ 1.3
PRKD2-207ENST00000597088 KRT37O76014 449 aa23.2■■□□□ 1.3
PRKD2-207ENST00000597088 F8A1P23610 371 aa23.2■■□□□ 1.3
PRKD2-207ENST00000597088 HRH2P25021 359 aa23.2■■□□□ 1.3
PRKD2-207ENST00000597088 GCGRP47871 477 aa23.2■■□□□ 1.3
PRKD2-207ENST00000597088 KCNC1P48547 511 aa23.2■■□□□ 1.3
PRKD2-207ENST00000597088 WASHC2DQ5SRD0 308 aa23.2■■□□□ 1.3
PRKD2-207ENST00000597088 C1orf189Q5VU69 101 aa23.2■■□□□ 1.3
PRKD2-207ENST00000597088 RHBDD2Q6NTF9 364 aa23.2■■□□□ 1.3
PRKD2-207ENST00000597088 THOC6Q86W42 341 aaKnown RBP23.2■■□□□ 1.3
PRKD2-207ENST00000597088 STAG3L4Q8TBR4 150 aa23.2■■□□□ 1.3
PRKD2-207ENST00000597088 TSNARE1Q96NA8 513 aa23.2■■□□□ 1.3
PRKD2-207ENST00000597088 CHST8Q9H2A9 424 aa23.2■■□□□ 1.3
PRKD2-207ENST00000597088 ENAMQ9NRM1 1142 aa23.2■■□□□ 1.3
PRKD2-207ENST00000597088 CD274Q9NZQ7 290 aa23.2■■□□□ 1.3
PRKD2-207ENST00000597088 DHCR7Q9UBM7 475 aaKnown RBP23.2■■□□□ 1.3
PRKD2-207ENST00000597088 LHX6Q9UPM6 363 aa23.2■■□□□ 1.3
PRKD2-207ENST00000597088 H0YGG7 62 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 KERAO60938 352 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 EIF2S1P05198 315 aaKnown RBP23.19■■□□□ 1.3
PRKD2-207ENST00000597088 KLK3P07288 261 aaPredicted RBP23.19■■□□□ 1.3
PRKD2-207ENST00000597088 SNRPAP09012 282 aaKnown RBP23.19■■□□□ 1.3
PRKD2-207ENST00000597088 TCN2P20062 427 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 GLRBP48167 497 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 ARF3P61204 181 aaPredicted RBP23.19■■□□□ 1.3
PRKD2-207ENST00000597088 CSNK1G2P78368 415 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 RELAQ04206 551 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 DNASE1L3Q13609 305 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 GRM7Q14831 915 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 FAM83EQ2M2I3 478 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 ZNF385CQ66K41 422 aaPredicted RBP23.19■■□□□ 1.3
PRKD2-207ENST00000597088 LCN10Q6JVE6 187 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 ADGRD1Q6QNK2 874 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 ZNF517Q6ZMY9 492 aaPredicted RBP23.19■■□□□ 1.3
PRKD2-207ENST00000597088 KLHDC8AQ8IYD2 350 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 TCAIMQ8N3R3 496 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 PDPRQ8NCN5 879 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 OR2A5Q96R48 311 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 ATOH8Q96SQ7 321 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 RUFY1Q96T51 708 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 TMEM79Q9BSE2 394 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 EFHD1Q9BUP0 239 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 TXLNGQ9NUQ3 528 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 WWOXQ9NZC7 414 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 FETUBQ9UGM5 382 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 SLC22A14Q9Y267 594 aa23.19■■□□□ 1.3
PRKD2-207ENST00000597088 MRPS18BQ9Y676 258 aaKnown RBP23.19■■□□□ 1.3
PRKD2-207ENST00000597088 FITM1A5D6W6 292 aa23.18■■□□□ 1.3
PRKD2-207ENST00000597088 SUPT3HB4E1H0 165 aa23.18■■□□□ 1.3
PRKD2-207ENST00000597088 TAPBPO15533 448 aa23.18■■□□□ 1.3
PRKD2-207ENST00000597088 SUPT3HO75486 399 aa23.18■■□□□ 1.3
PRKD2-207ENST00000597088 WDR47O94967 919 aa23.18■■□□□ 1.3
PRKD2-207ENST00000597088 KLHL2O95198 593 aa23.18■■□□□ 1.3
PRKD2-207ENST00000597088 S100BP04271 92 aaPredicted RBP23.18■■□□□ 1.3
PRKD2-207ENST00000597088 GDF5P43026 501 aa23.18■■□□□ 1.3
PRKD2-207ENST00000597088 SLC6A12P48065 614 aa23.18■■□□□ 1.3
PRKD2-207ENST00000597088 ERCC6LQ2NKX8 1250 aa23.18■■□□□ 1.3
PRKD2-207ENST00000597088 CDKL4Q5MAI5 379 aa23.18■■□□□ 1.3
PRKD2-207ENST00000597088 WDR93Q6P2C0 686 aa23.18■■□□□ 1.3
PRKD2-207ENST00000597088 TTC29Q8NA56 475 aaPredicted RBP23.18■■□□□ 1.3
PRKD2-207ENST00000597088 ZSCAN1Q8NBB4 408 aa23.18■■□□□ 1.3
PRKD2-207ENST00000597088 PROKR1Q8TCW9 393 aa23.18■■□□□ 1.3
PRKD2-207ENST00000597088 SNRNP27Q8WVK2 155 aaKnown RBP23.18■■□□□ 1.3
PRKD2-207ENST00000597088 SLC5A11Q8WWX8 675 aa23.18■■□□□ 1.3
PRKD2-207ENST00000597088 NEIL2Q969S2 332 aa23.18■■□□□ 1.3
PRKD2-207ENST00000597088 SLC45A3Q96JT2 553 aa23.18■■□□□ 1.3
PRKD2-207ENST00000597088 NUDT4Q9NZJ9 180 aa23.18■■□□□ 1.3
PRKD2-207ENST00000597088 DYRK1BQ9Y463 629 aa23.18■■□□□ 1.3
PRKD2-207ENST00000597088 MGAQ8IWI9 3026 aa23.17■■□□□ 1.3
PRKD2-207ENST00000597088 C21orf140B9A014 251 aa23.17■■□□□ 1.3
PRKD2-207ENST00000597088 UBXN8O00124 270 aa23.17■■□□□ 1.3
PRKD2-207ENST00000597088 SHBGP04278 402 aa23.17■■□□□ 1.3
PRKD2-207ENST00000597088 ARSFP54793 590 aa23.17■■□□□ 1.3
PRKD2-207ENST00000597088 FBXO48Q5FWF7 155 aa23.17■■□□□ 1.3
PRKD2-207ENST00000597088 CATSPEREQ5SY80 951 aa23.17■■□□□ 1.3
PRKD2-207ENST00000597088 LGSNQ5TDP6 509 aa23.17■■□□□ 1.3
PRKD2-207ENST00000597088 SULT1C3Q6IMI6 304 aa23.17■■□□□ 1.3
PRKD2-207ENST00000597088 KLC3Q6P597 504 aa23.17■■□□□ 1.3
PRKD2-207ENST00000597088 FAM198BQ6UWH4 519 aa23.17■■□□□ 1.3
PRKD2-207ENST00000597088 TTLL10Q6ZVT0 673 aa23.17■■□□□ 1.3
PRKD2-207ENST00000597088 GPR155Q7Z3F1 870 aa23.17■■□□□ 1.3
PRKD2-207ENST00000597088 PLD6Q8N2A8 252 aaKnown RBP23.17■■□□□ 1.3
PRKD2-207ENST00000597088 CSNK1A1LQ8N752 337 aa23.17■■□□□ 1.3
PRKD2-207ENST00000597088 ABHD11Q8NFV4 315 aa23.17■■□□□ 1.3
PRKD2-207ENST00000597088 STARD8Q92502 1023 aa23.17■■□□□ 1.3
PRKD2-207ENST00000597088 RERGQ96A58 199 aaPredicted RBP23.17■■□□□ 1.3
PRKD2-207ENST00000597088 GPR78Q96P69 363 aa23.17■■□□□ 1.3
PRKD2-207ENST00000597088 GBP5Q96PP8 586 aa23.17■■□□□ 1.3
PRKD2-207ENST00000597088 DPH2Q9BQC3 489 aaPredicted RBP23.17■■□□□ 1.3
PRKD2-207ENST00000597088 CCDC77Q9BR77 488 aa23.17■■□□□ 1.3
PRKD2-207ENST00000597088 CUTCQ9NTM9 273 aa23.17■■□□□ 1.3
PRKD2-207ENST00000597088 PSMC3IPQ9P2W1 217 aaPredicted RBP23.17■■□□□ 1.3
PRKD2-207ENST00000597088 LOC400499M0QZD8 3231 aa23.17■■□□□ 1.3
PRKD2-207ENST00000597088 FEZF1A0PJY2 475 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms