RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 TIPARPQ7Z3E1 657 aaKnown RBP10.13□□□□□ -0.79
LIG1-210ENST00000596332 VN1R5Q7Z5H4 357 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 MCATQ8IVS2 390 aaKnown RBP10.13□□□□□ -0.79
LIG1-210ENST00000596332 TCAIMQ8N3R3 496 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 ANKRD53Q8N9V6 530 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 TCP10LQ8TDR4 215 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 ZNF483Q8TF39 744 aaPredicted RBP10.13□□□□□ -0.79
LIG1-210ENST00000596332 ALKBH8Q96BT7 664 aaKnown RBP10.13□□□□□ -0.79
LIG1-210ENST00000596332 PHF21BQ96EK2 531 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 RNF31Q96EP0 1072 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 APOPT1Q96IL0 206 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 SCYL1Q96KG9 808 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 OR6C1Q96RD1 312 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 CMKLR1Q99788 373 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 PCBD2Q9H0N5 130 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 SSU72Q9NP77 194 aaKnown RBP10.13□□□□□ -0.79
LIG1-210ENST00000596332 FGF21Q9NSA1 209 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 ABCF3Q9NUQ8 709 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 PCTPQ9UKL6 214 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 GRID1Q9ULK0 1009 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 ACTL7BQ9Y614 415 aa10.13□□□□□ -0.79
LIG1-210ENST00000596332 ZFHX4Q86UP3 3567 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 FEZF1A0PJY2 475 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 FITM1A5D6W6 292 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 SYCE1LA8MT33 242 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 K7EPI3 171 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 UBFD1O14562 309 aaKnown RBP10.12□□□□□ -0.79
LIG1-210ENST00000596332 COPEO14579 308 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 NVLO15381 856 aaKnown RBP10.12□□□□□ -0.79
LIG1-210ENST00000596332 RGS16O15492 202 aaPredicted RBP10.12□□□□□ -0.79
LIG1-210ENST00000596332 P2RX6O15547 441 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 TLX3O43711 291 aaPredicted RBP10.12□□□□□ -0.79
LIG1-210ENST00000596332 BRINP1O60477 761 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 IPO13O94829 963 aaKnown RBP10.12□□□□□ -0.79
LIG1-210ENST00000596332 WDR47O94967 919 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 TNFSF15O95150 251 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 C1GALT1C1LP0DN25 315 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 ITGAXP20702 1163 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 IMPDH1P20839 514 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 EEF1DP29692 281 aaKnown RBP10.12□□□□□ -0.79
LIG1-210ENST00000596332 BCL6P41182 706 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 CCR10P46092 362 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 CCT5P48643 541 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 PRKAA2P54646 552 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 GABREP78334 506 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 HYAL2Q12891 473 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 CDC16Q13042 620 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 TRAF3Q13114 568 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 TSTA3Q13630 321 aaPredicted RBP10.12□□□□□ -0.79
LIG1-210ENST00000596332 DOC2AQ14183 400 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 PRTGQ2VWP7 1150 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 ZNF678Q5SXM1 525 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 ZNF385CQ66K41 422 aaPredicted RBP10.12□□□□□ -0.79
LIG1-210ENST00000596332 LCN10Q6JVE6 187 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 METTL2BQ6P1Q9 378 aaKnown RBP10.12□□□□□ -0.79
LIG1-210ENST00000596332 KLC3Q6P597 504 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 LRRC70Q7Z2Q7 622 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 HDXQ7Z353 690 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 GOLGA7Q7Z5G4 137 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 C17orf64Q86WR6 236 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 TMEM151BQ8IW70 566 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 RAB42Q8N4Z0 105 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 DTWD1Q8N5C7 304 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 SLC5A11Q8WWX8 675 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 L3HYPDHQ96EM0 354 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 TSNARE1Q96NA8 513 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 TMEM237Q96Q45 408 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 TAAR9Q96RI9 348 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 HAUS8Q9BT25 410 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 B3GNT4Q9C0J1 378 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 STRADBQ9C0K7 418 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 GSTO2Q9H4Y5 243 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 PDE7BQ9NP56 450 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 TNFRSF12AQ9NP84 129 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 DNAJC11Q9NVH1 559 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 OXSMQ9NWU1 459 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 GEMIN8Q9NWZ8 242 aaKnown RBP10.12□□□□□ -0.79
LIG1-210ENST00000596332 SLC39A1Q9NY26 324 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 WWOXQ9NZC7 414 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 GPRC5BQ9NZH0 403 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 ANKMY1Q9P2S6 941 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 DKK4Q9UBT3 224 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 PISDQ9UG56 409 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 ACSL6Q9UKU0 697 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 SNX7Q9UNH6 387 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 PCM1Q15154 2024 aa10.12□□□□□ -0.79
LIG1-210ENST00000596332 CELSR3Q9NYQ7 3312 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 DMXL2Q8TDJ6 3036 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 A0A0J9YVX5 310 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 C1QTNF9BB2RNN3 333 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 H0YGG7 62 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 PRPF4O43172 522 aaKnown RBP eCLIP10.11□□□□□ -0.79
LIG1-210ENST00000596332 CCNT2O60583 730 aaKnown RBP10.11□□□□□ -0.79
LIG1-210ENST00000596332 DLGAP3O95886 979 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 C1QTNF9P0C862 333 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 GFAPP14136 432 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 TSPAN8P19075 237 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 ATP5F1P24539 256 aaPredicted RBP10.11□□□□□ -0.79
LIG1-210ENST00000596332 ALDH3A1P30838 453 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 SLC5A2P31639 672 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms