RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 FAM83EQ2M2I3 478 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 PTCHD3Q3KNS1 767 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 C1orf189Q5VU69 101 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 FRMPD2BQ6IN97 320 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 C16orf46Q6P387 395 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 TTLL10Q6ZVT0 673 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 CMC1Q7Z7K0 106 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 SYVN1Q86TM6 617 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 LRRN4CLQ8ND94 238 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 PYCR2Q96C36 320 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 WBP1Q96G27 269 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 GBP5Q96PP8 586 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 PAFAH2Q99487 392 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 CCDC77Q9BR77 488 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 CAPS2Q9BXY5 557 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 CNOT10Q9H9A5 744 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 AKIRIN1Q9H9L7 192 aaPredicted RBP16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 CUEDC1Q9NWM3 386 aaPredicted RBP16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 IFT80Q9P2H3 777 aaPredicted RBP16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 DHCR7Q9UBM7 475 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 ZNF180Q9UJW8 692 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 RNF112Q9ULX5 631 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 PADI2Q9Y2J8 665 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 KCNE2Q9Y6J6 123 aa16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 DSPP15924 2871 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-212ENST00000596163 PTPRQQ9UMZ3 2332 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 KCNE1BA0A087WTH5 132 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 LOC105369274A0A096LPK9 316 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 LOC102723532A0A0G2JNH3 316 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 EXOC1LA0A1B0GW35 172 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 HYKKA2RU49 373 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 HAT1O14929 419 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 DSCR3O14972 297 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 C2P06681 752 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 CTSBP07858 339 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 TNFRSF8P28908 595 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 CSNK1G2P78368 415 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 BMPR2Q13873 1038 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 MUM1Q2TAK8 710 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 NKAIN1Q4KMZ8 207 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 ZNF385CQ66K41 422 aaPredicted RBP16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 SULT1C3Q6IMI6 304 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 KLC3Q6P597 504 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 THOC6Q86W42 341 aaKnown RBP16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 OR4N4Q8N0Y3 316 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 CSNK1A1LQ8N752 337 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 UHMK1Q8TAS1 419 aaKnown RBP16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 SLC5A11Q8WWX8 675 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 OR2A5Q96R48 311 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 UNKQ9C0B0 810 aaKnown RBP16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 ACTL8Q9H568 366 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 SNX15Q9NRS6 342 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 STARD5Q9NSY2 213 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 CD274Q9NZQ7 290 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 CDC14AQ9UNH5 594 aa16.52■□□□□ 0.24
SHKBP1-212ENST00000596163 CHD6Q8TD26 2715 aa16.52■□□□□ 0.23
SHKBP1-212ENST00000596163 A0A096LPK6 155 aa16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 RIPK2O43353 540 aa16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 IPO13O94829 963 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 SLU7O95391 586 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 PRKAR1AP10644 381 aa16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 CDH1P12830 882 aa16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 TFEBP19484 476 aa16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 GCGRP47871 477 aa16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 CDC20Q12834 499 aa16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 ERV3-1Q14264 604 aa16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 NCF4Q15080 339 aa16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 NDUFA9Q16795 377 aa16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 GARNL3Q5VVW2 1013 aa16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 MLIPQ5VWP3 458 aa16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 PRMT9Q6P2P2 845 aa16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 ENDOVQ8N8Q3 282 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 ABHD11Q8NFV4 315 aa16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 RHBDF1Q96CC6 855 aa16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 CABS1Q96KC9 395 aa16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 ARHGAP9Q9BRR9 750 aa16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 WWOXQ9NZC7 414 aa16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 SLC22A14Q9Y267 594 aa16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 MRPS18BQ9Y676 258 aaKnown RBP16.51■□□□□ 0.23
SHKBP1-212ENST00000596163 HMX2A2RU54 273 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 NCF1BA6NI72 391 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 SYCE1LA8MT33 242 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 NCF1CA8MVU1 366 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 PRPF4O43172 522 aaKnown RBP eCLIP16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 NRP2O60462 931 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 H2AFYO75367 372 aaKnown RBP16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 ONECUT2O95948 504 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 FAM153BP0C7A2 387 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 NCF1P14598 390 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 GGT5P36269 586 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 CYP4F2P78329 520 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 ACAP2Q15057 778 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 OR4D1Q15615 310 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 ZXDCQ2QGD7 858 aaPredicted RBP16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 PRTGQ2VWP7 1150 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 FAM153CQ494X1 144 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 UBAP2Q5T6F2 1119 aaKnown RBP16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 LCN10Q6JVE6 187 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 BORAQ6PGQ7 559 aa16.5■□□□□ 0.23
SHKBP1-212ENST00000596163 FAM198BQ6UWH4 519 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms