RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 FAAH2Q6GMR7 532 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 KIAA0930Q6ICG6 404 aaPredicted RBP14.03□□□□□ -0.16
PNKP-202ENST00000593706 CES3Q6UWW8 571 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 NDUFAF7Q7L592 441 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 OR4N4Q8N0Y3 316 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 MCUQ8NE86 351 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 OR2A1Q8NGT9 310 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 HMGCLL1Q8TB92 370 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 C10orf90Q96M02 699 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 UNKQ9C0B0 810 aaKnown RBP14.03□□□□□ -0.16
PNKP-202ENST00000593706 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.03□□□□□ -0.16
PNKP-202ENST00000593706 RUBCNLQ9H714 662 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 SPATA7Q9P0W8 599 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 COPG2Q9UBF2 871 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 TRPC4Q9UBN4 977 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 KLK4Q9Y5K2 254 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 NCOA6Q14686 2063 aaPredicted RBP14.03□□□□□ -0.16
PNKP-202ENST00000593706 C2CD3Q4AC94 2353 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 F8P00451 2351 aa14.02□□□□□ -0.16
PNKP-202ENST00000593706 IDSB3KWA1 339 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 FFAR3O14843 346 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 GPR42O15529 346 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 VAPBO95292 243 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 F10P00742 488 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 PRF1P14222 555 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 RPS3P23396 243 aaKnown RBP eCLIP14.02□□□□□ -0.17
PNKP-202ENST00000593706 ELAVL4P26378 380 aaKnown RBP14.02□□□□□ -0.17
PNKP-202ENST00000593706 TNFSF10P50591 281 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 EMP2P54851 167 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 DSG2Q14126 1118 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 CTSL3PQ5NE16 218 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 ATG9BQ674R7 924 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 GFRALQ6UXV0 394 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 LRRC6Q86X45 466 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 MCEMP1Q8IX19 187 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 NAT8LQ8N9F0 302 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 NR4A3Q92570 626 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 LPGAT1Q92604 370 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 SLCO2A1Q92959 643 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 BIRC8Q96P09 236 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 SERPINB12Q96P63 405 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 PHF12Q96QT6 1004 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 DPH7Q9BTV6 452 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 XAB2Q9HCS7 855 aaKnown RBP14.02□□□□□ -0.17
PNKP-202ENST00000593706 C14orf105Q9NVL8 296 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 RIC8BQ9NVN3 520 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 PLA2G3Q9NZ20 509 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 SUCOQ9UBS9 1254 aaKnown RBP14.02□□□□□ -0.17
PNKP-202ENST00000593706 PYCARDQ9ULZ3 195 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 CCDC168Q8NDH2 2452 aa14.02□□□□□ -0.17
PNKP-202ENST00000593706 AKAP9Q99996 3911 aa14.01□□□□□ -0.17
PNKP-202ENST00000593706 IGLV3-12A0A075B6K2 115 aa14.01□□□□□ -0.17
PNKP-202ENST00000593706 ZCWPW2A0A1B0GU75 182 aa14.01□□□□□ -0.17
PNKP-202ENST00000593706 FAM237BA0A1B0GVD1 139 aa14.01□□□□□ -0.17
PNKP-202ENST00000593706 A0A1W2PPV9 198 aa14.01□□□□□ -0.17
PNKP-202ENST00000593706 OR2A25A4D2G3 310 aa14.01□□□□□ -0.17
PNKP-202ENST00000593706 H0YGG7 62 aa14.01□□□□□ -0.17
PNKP-202ENST00000593706 WFS1O76024 890 aa14.01□□□□□ -0.17
PNKP-202ENST00000593706 SERPINA7P05543 415 aa14.01□□□□□ -0.17
PNKP-202ENST00000593706 HEXBP07686 556 aa14.01□□□□□ -0.17
PNKP-202ENST00000593706 ANXA5P08758 320 aa14.01□□□□□ -0.17
PNKP-202ENST00000593706 RPA3P35244 121 aaPredicted RBP14.01□□□□□ -0.17
PNKP-202ENST00000593706 SOX11P35716 441 aa14.01□□□□□ -0.17
PNKP-202ENST00000593706 TDGF1P3P51864 188 aa14.01□□□□□ -0.17
PNKP-202ENST00000593706 ADARP55265 1226 aaKnown RBP14.01□□□□□ -0.17
PNKP-202ENST00000593706 ARF3P61204 181 aaPredicted RBP14.01□□□□□ -0.17
PNKP-202ENST00000593706 FASTKQ14296 549 aaKnown RBP14.01□□□□□ -0.17
PNKP-202ENST00000593706 GBX1Q14549 363 aa14.01□□□□□ -0.17
PNKP-202ENST00000593706 RNASEH2BQ5TBB1 312 aaKnown RBP14.01□□□□□ -0.17
PNKP-202ENST00000593706 SP5Q6BEB4 398 aaPredicted RBP14.01□□□□□ -0.17
PNKP-202ENST00000593706 LAPTM4BQ86VI4 370 aa14.01□□□□□ -0.17
PNKP-202ENST00000593706 CSNK1A1LQ8N752 337 aa14.01□□□□□ -0.17
PNKP-202ENST00000593706 SUN3Q8TAQ9 357 aa14.01□□□□□ -0.17
PNKP-202ENST00000593706 RERGQ96A58 199 aaPredicted RBP14.01□□□□□ -0.17
PNKP-202ENST00000593706 FAM136AQ96C01 138 aa14.01□□□□□ -0.17
PNKP-202ENST00000593706 MVB12AQ96EY5 273 aa14.01□□□□□ -0.17
PNKP-202ENST00000593706 MMABQ96EY8 250 aaPredicted RBP14.01□□□□□ -0.17
PNKP-202ENST00000593706 TAAR6Q96RI8 345 aa14.01□□□□□ -0.17
PNKP-202ENST00000593706 MRPS30Q9NP92 439 aaKnown RBP14.01□□□□□ -0.17
PNKP-202ENST00000593706 RUVBL1Q9Y265 456 aaKnown RBP14.01□□□□□ -0.17
PNKP-202ENST00000593706 MRPS2Q9Y399 296 aaKnown RBP14.01□□□□□ -0.17
PNKP-202ENST00000593706 IGHV1-45A0A0A0MS14 117 aa14□□□□□ -0.17
PNKP-202ENST00000593706 TRGV8A0A0C4DH27 118 aa14□□□□□ -0.17
PNKP-202ENST00000593706 GOLGA8KD6RF30 607 aa14□□□□□ -0.17
PNKP-202ENST00000593706 GOLGA8TH3BQL2 631 aa14□□□□□ -0.17
PNKP-202ENST00000593706 PCDH17O14917 1159 aa14□□□□□ -0.17
PNKP-202ENST00000593706 PFDN6O15212 129 aa14□□□□□ -0.17
PNKP-202ENST00000593706 UNC5CO95185 931 aa14□□□□□ -0.17
PNKP-202ENST00000593706 BMP10O95393 424 aa14□□□□□ -0.17
PNKP-202ENST00000593706 TCP1P17987 556 aaKnown RBP14□□□□□ -0.17
PNKP-202ENST00000593706 TERF1P54274 439 aa14□□□□□ -0.17
PNKP-202ENST00000593706 AP2B1P63010 937 aa14□□□□□ -0.17
PNKP-202ENST00000593706 YBX1P67809 324 aaKnown RBP14□□□□□ -0.17
PNKP-202ENST00000593706 HKDC1Q2TB90 917 aa14□□□□□ -0.17
PNKP-202ENST00000593706 PRTGQ2VWP7 1150 aa14□□□□□ -0.17
PNKP-202ENST00000593706 MRNIPQ6NTE8 343 aa14□□□□□ -0.17
PNKP-202ENST00000593706 SUSD1Q6UWL2 747 aa14□□□□□ -0.17
PNKP-202ENST00000593706 RIPOR1Q6ZS17 1223 aa14□□□□□ -0.17
PNKP-202ENST00000593706 CREG2Q8IUH2 290 aa14□□□□□ -0.17
PNKP-202ENST00000593706 PSMF1Q92530 271 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms