RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 TCP11X1B4DZS4 312 aa22.16■■□□□ 1.14
MBD3-211ENST00000592965 DNALI1O14645 258 aaPredicted RBP22.16■■□□□ 1.14
MBD3-211ENST00000592965 PRPF4O43172 522 aaKnown RBP eCLIP22.16■■□□□ 1.145e-7■■■■□ 20.7
MBD3-211ENST00000592965 GP1BBP13224 206 aa22.16■■□□□ 1.14
MBD3-211ENST00000592965 IMPA1P29218 277 aa22.16■■□□□ 1.14
MBD3-211ENST00000592965 IRAK1BP1Q5VVH5 260 aa22.16■■□□□ 1.14
MBD3-211ENST00000592965 IGFL2Q6UWQ7 119 aa22.16■■□□□ 1.14
MBD3-211ENST00000592965 UBE2R2Q712K3 238 aaPredicted RBP22.16■■□□□ 1.14
MBD3-211ENST00000592965 ARHGEF39Q8N4T4 335 aa22.16■■□□□ 1.14
MBD3-211ENST00000592965 GABPB2Q8TAK5 448 aaPredicted RBP22.16■■□□□ 1.14
MBD3-211ENST00000592965 RERGQ96A58 199 aaPredicted RBP22.16■■□□□ 1.14
MBD3-211ENST00000592965 SNRNP40Q96DI7 357 aaKnown RBP22.16■■□□□ 1.14
MBD3-211ENST00000592965 EBNA1BP2Q99848 306 aaKnown RBP22.16■■□□□ 1.14
MBD3-211ENST00000592965 NAT9Q9BTE0 207 aa22.16■■□□□ 1.14
MBD3-211ENST00000592965 LHPPQ9H008 270 aa22.16■■□□□ 1.14
MBD3-211ENST00000592965 ILKAPQ9H0C8 392 aaPredicted RBP22.16■■□□□ 1.14
MBD3-211ENST00000592965 DDX47Q9H0S4 455 aaKnown RBP22.16■■□□□ 1.14
MBD3-211ENST00000592965 PCYOX1Q9UHG3 505 aa22.16■■□□□ 1.14
MBD3-211ENST00000592965 TRMT6Q9UJA5 497 aaKnown RBP22.16■■□□□ 1.14
MBD3-211ENST00000592965 C3orf18Q9UK00 162 aa22.16■■□□□ 1.14
MBD3-211ENST00000592965 UNC79Q9P2D8 2635 aa22.15■■□□□ 1.14
MBD3-211ENST00000592965 TXNDC9O14530 226 aa22.15■■□□□ 1.14
MBD3-211ENST00000592965 ACPPP15309 386 aa22.15■■□□□ 1.14
MBD3-211ENST00000592965 TIAL1Q01085 375 aaKnown RBP eCLIP22.15■■□□□ 1.14
MBD3-211ENST00000592965 HKDC1Q2TB90 917 aa22.15■■□□□ 1.14
MBD3-211ENST00000592965 CRB2Q5IJ48 1285 aa22.15■■□□□ 1.14
MBD3-211ENST00000592965 AGAP7PQ5VUJ5 663 aa22.15■■□□□ 1.14
MBD3-211ENST00000592965 UGT3A1Q6NUS8 523 aa22.15■■□□□ 1.14
MBD3-211ENST00000592965 PCGF5Q86SE9 256 aa22.15■■□□□ 1.14
MBD3-211ENST00000592965 CNTN4Q8IWV2 1026 aa22.15■■□□□ 1.14
MBD3-211ENST00000592965 AGAP4Q96P64 663 aa22.15■■□□□ 1.14
MBD3-211ENST00000592965 WDR77Q9BQA1 342 aaPredicted RBP22.15■■□□□ 1.14
MBD3-211ENST00000592965 KCNF1Q9H3M0 494 aa22.15■■□□□ 1.14
MBD3-211ENST00000592965 MAP10Q9P2G4 905 aa22.15■■□□□ 1.14
MBD3-211ENST00000592965 PCDHGA10Q9Y5H3 936 aa22.15■■□□□ 1.14
MBD3-211ENST00000592965 A0A1W2PQ72 361 aa22.14■■□□□ 1.13
MBD3-211ENST00000592965 BLACEA4D250 179 aa22.14■■□□□ 1.13
MBD3-211ENST00000592965 MAP2K7O14733 419 aa22.14■■□□□ 1.13
MBD3-211ENST00000592965 AGFG2O95081 481 aa22.14■■□□□ 1.13
MBD3-211ENST00000592965 HPP00738 406 aa22.14■■□□□ 1.13
MBD3-211ENST00000592965 TCP1P17987 556 aaKnown RBP22.14■■□□□ 1.13
MBD3-211ENST00000592965 SLC26A3P40879 764 aa22.14■■□□□ 1.13
MBD3-211ENST00000592965 DHX9Q08211 1270 aaKnown RBP22.14■■□□□ 1.13
MBD3-211ENST00000592965 SPANXN3Q5MJ09 141 aa22.14■■□□□ 1.13
MBD3-211ENST00000592965 THEMIS2Q5TEJ8 643 aa22.14■■□□□ 1.13
MBD3-211ENST00000592965 ATG9BQ674R7 924 aa22.14■■□□□ 1.13
MBD3-211ENST00000592965 KIAA0408Q6ZU52 694 aa22.14■■□□□ 1.13
MBD3-211ENST00000592965 ADCK2Q7Z695 626 aa22.14■■□□□ 1.13
MBD3-211ENST00000592965 CUZD1Q86UP6 607 aa22.14■■□□□ 1.13
MBD3-211ENST00000592965 PRSS58Q8IYP2 241 aa22.14■■□□□ 1.13
MBD3-211ENST00000592965 AMER3Q8N944 861 aa22.14■■□□□ 1.13
MBD3-211ENST00000592965 PPP4R1Q8TF05 950 aa22.14■■□□□ 1.13
MBD3-211ENST00000592965 C19orf60Q96EN9 201 aa22.14■■□□□ 1.13
MBD3-211ENST00000592965 NDNQ99608 321 aa22.14■■□□□ 1.13
MBD3-211ENST00000592965 CCDC177Q9NQR7 707 aaPredicted RBP22.14■■□□□ 1.13
MBD3-211ENST00000592965 C14orf105Q9NVL8 296 aa22.14■■□□□ 1.13
MBD3-211ENST00000592965 CUEDC1Q9NWM3 386 aaPredicted RBP22.14■■□□□ 1.13
MBD3-211ENST00000592965 TAS2R13Q9NYV9 303 aa22.14■■□□□ 1.13
MBD3-211ENST00000592965 TRPC4Q9UBN4 977 aa22.14■■□□□ 1.13
MBD3-211ENST00000592965 SVILO95425 2214 aa22.13■■□□□ 1.13
MBD3-211ENST00000592965 HAT1O14929 419 aa22.13■■□□□ 1.13
MBD3-211ENST00000592965 P2RX6O15547 441 aa22.13■■□□□ 1.13
MBD3-211ENST00000592965 C8GP07360 202 aa22.13■■□□□ 1.13
MBD3-211ENST00000592965 HRH2P25021 359 aa22.13■■□□□ 1.13
MBD3-211ENST00000592965 GABRB3P28472 473 aa22.13■■□□□ 1.13
MBD3-211ENST00000592965 RGS4P49798 205 aa22.13■■□□□ 1.13
MBD3-211ENST00000592965 TBPL1P62380 186 aa22.13■■□□□ 1.13
MBD3-211ENST00000592965 SP140Q13342 867 aa22.13■■□□□ 1.13
MBD3-211ENST00000592965 MSS51Q4VC12 460 aa22.13■■□□□ 1.13
MBD3-211ENST00000592965 VWA2Q5GFL6 755 aa22.13■■□□□ 1.13
MBD3-211ENST00000592965 GALNT7Q86SF2 657 aa22.13■■□□□ 1.13
MBD3-211ENST00000592965 PARP9Q8IXQ6 854 aa22.13■■□□□ 1.13
MBD3-211ENST00000592965 CISD2Q8N5K1 135 aaKnown RBP22.13■■□□□ 1.13
MBD3-211ENST00000592965 CCDC138Q96M89 665 aa22.13■■□□□ 1.13
MBD3-211ENST00000592965 BARD1Q99728 777 aaKnown RBP22.13■■□□□ 1.13
MBD3-211ENST00000592965 MESP1Q9BRJ9 268 aa22.13■■□□□ 1.13
MBD3-211ENST00000592965 TGIF2Q9GZN2 237 aa22.13■■□□□ 1.13
MBD3-211ENST00000592965 DRC3Q9H069 523 aa22.13■■□□□ 1.13
MBD3-211ENST00000592965 PCBD2Q9H0N5 130 aa22.13■■□□□ 1.13
MBD3-211ENST00000592965 MKKSQ9NPJ1 570 aaPredicted RBP22.13■■□□□ 1.13
MBD3-211ENST00000592965 ABCF3Q9NUQ8 709 aa22.13■■□□□ 1.13
MBD3-211ENST00000592965 ASF1BQ9NVP2 202 aa22.13■■□□□ 1.13
MBD3-211ENST00000592965 TRMT1Q9NXH9 659 aaKnown RBP22.13■■□□□ 1.13
MBD3-211ENST00000592965 FOXS1O43638 330 aa22.12■■□□□ 1.13
MBD3-211ENST00000592965 BANF1O75531 89 aa22.12■■□□□ 1.13
MBD3-211ENST00000592965 IVDP26440 423 aa22.12■■□□□ 1.13
MBD3-211ENST00000592965 Q0VFX4 171 aa22.12■■□□□ 1.13
MBD3-211ENST00000592965 MRPL49Q13405 166 aaKnown RBP22.12■■□□□ 1.13
MBD3-211ENST00000592965 FAM53BQ14153 422 aa22.12■■□□□ 1.13
MBD3-211ENST00000592965 LAPTM4BQ86VI4 370 aa22.12■■□□□ 1.13
MBD3-211ENST00000592965 MCOLN3Q8TDD5 553 aa22.12■■□□□ 1.13
MBD3-211ENST00000592965 EEF1AKMT1Q8WVE0 214 aa22.12■■□□□ 1.13
MBD3-211ENST00000592965 TMEM184CQ9NVA4 438 aa22.12■■□□□ 1.13
MBD3-211ENST00000592965 ADAMTS6Q9UKP5 1117 aa22.12■■□□□ 1.13
MBD3-211ENST00000592965 PDE10AQ9Y233 779 aa22.12■■□□□ 1.13
MBD3-211ENST00000592965 CENPEQ02224 2701 aa22.11■■□□□ 1.13
MBD3-211ENST00000592965 IDSB3KWA1 339 aa22.11■■□□□ 1.13
MBD3-211ENST00000592965 H7BY64 318 aa22.11■■□□□ 1.13
MBD3-211ENST00000592965 PCDH17O14917 1159 aa22.11■■□□□ 1.13
MBD3-211ENST00000592965 SLC16A5O15375 505 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms