RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 FRMPD2BQ6IN97 320 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 LCN10Q6JVE6 187 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 FBXO42Q6P3S6 717 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 TAOK1Q7L7X3 1001 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 TBC1D1Q86TI0 1168 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-227ENST00000591849 PAQR7Q86WK9 346 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 GPSM1Q86YR5 675 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 CEP97Q8IW35 865 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 OR4N4Q8N0Y3 316 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 SPATA6LQ8N4H0 392 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 CSNK1A1LQ8N752 337 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 TTC9Q92623 222 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 COL26A1Q96A83 441 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 PYCR2Q96C36 320 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 RUFY1Q96T51 708 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 DHRS4Q9BTZ2 278 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 UNKQ9C0B0 810 aaKnown RBP9.64□□□□□ -0.87
BRCA1-227ENST00000591849 CUEDC1Q9NWM3 386 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-227ENST00000591849 TCFL5Q9UL49 500 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 MAN2B2Q9Y2E5 1009 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 PTRH2Q9Y3E5 179 aaKnown RBP9.64□□□□□ -0.87
BRCA1-227ENST00000591849 KLK4Q9Y5K2 254 aa9.64□□□□□ -0.87
BRCA1-227ENST00000591849 PRPF4O43172 522 aaKnown RBP eCLIP9.63□□□□□ -0.875e-17■■■■■ 29.7
BRCA1-227ENST00000591849 H2AFYO75367 372 aaKnown RBP9.63□□□□□ -0.87
BRCA1-227ENST00000591849 RECKO95980 971 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 FAM87AP0C7U9 286 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 CDH1P12830 882 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 OTX2P32243 289 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 MSH2P43246 934 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 HNMTP50135 292 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 CCR8P51685 355 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 RPS15AP62244 130 aaKnown RBP9.63□□□□□ -0.87
BRCA1-227ENST00000591849 EFTUD2Q15029 972 aaKnown RBP eCLIP9.63□□□□□ -0.87
BRCA1-227ENST00000591849 NCF4Q15080 339 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 UGT8Q16880 541 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 CRTC2Q53ET0 693 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-227ENST00000591849 TEX35Q5T0J7 233 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 MROH9Q5TGP6 573 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 LCTLQ6UWM7 567 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 RNF44Q7L0R7 432 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 RAB43Q86YS6 212 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 PLD3Q8IV08 490 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 LRRC56Q8IYG6 542 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-227ENST00000591849 METTL27Q8N6F8 245 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-227ENST00000591849 UHMK1Q8TAS1 419 aaKnown RBP9.63□□□□□ -0.87
BRCA1-227ENST00000591849 ANKRD49Q8WVL7 239 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 THAP4Q8WY91 577 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 EXT2Q93063 718 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 GBP5Q96PP8 586 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 DERL2Q9GZP9 239 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 CDC42EP4Q9H3Q1 356 aaKnown RBP9.63□□□□□ -0.87
BRCA1-227ENST00000591849 NMRAL1Q9HBL8 299 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 WWOXQ9NZC7 414 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 CD274Q9NZQ7 290 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 RNF112Q9ULX5 631 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 NFU1Q9UMS0 254 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 G3BP2Q9UN86 482 aaKnown RBP9.63□□□□□ -0.87
BRCA1-227ENST00000591849 ACOT9Q9Y305 439 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 OARD1Q9Y530 152 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 KCNE2Q9Y6J6 123 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 MAU2Q9Y6X3 613 aa9.63□□□□□ -0.87
BRCA1-227ENST00000591849 A0A087WUV0 522 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-227ENST00000591849 POC1B-GALNT4F8VUJ3 575 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 PEX12O00623 359 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 TERTO14746 1132 aaKnown RBP9.62□□□□□ -0.87
BRCA1-227ENST00000591849 HAT1O14929 419 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 NRP2O60462 931 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 SERPIND1P05546 499 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 LTA4HP09960 611 aaKnown RBP9.62□□□□□ -0.87
BRCA1-227ENST00000591849 NPPBP16860 134 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 FBLP22087 321 aaKnown RBP9.62□□□□□ -0.87
BRCA1-227ENST00000591849 TYK2P29597 1187 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 OR1D4P47884 311 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 POLE2P56282 527 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 RELAQ04206 551 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 OCA2Q04671 838 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 LINC00303Q3SY05 128 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 LGSNQ5TDP6 509 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 ZNF425Q6IV72 752 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 PRMT9Q6P2P2 845 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 KLC3Q6P597 504 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 FAM198BQ6UWH4 519 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 SBSNQ6UWP8 590 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 ZNF517Q6ZMY9 492 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-227ENST00000591849 CCDC91Q7Z6B0 441 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 ZNF605Q86T29 641 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 THOC6Q86W42 341 aaKnown RBP9.62□□□□□ -0.87
BRCA1-227ENST00000591849 RELL1Q8IUW5 271 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 SNX31Q8N9S9 440 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 CAMKVQ8NCB2 501 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 OR56A3Q8NH54 315 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 STAG3L4Q8TBR4 150 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 THAP11Q96EK4 314 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 TSNARE1Q96NA8 513 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 SGPP1Q9BX95 441 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 ACSS3Q9H6R3 686 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 CNOT10Q9H9A5 744 aaKnown RBP9.62□□□□□ -0.87
BRCA1-227ENST00000591849 ZNF304Q9HCX3 659 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 ACSS2Q9NR19 701 aa9.62□□□□□ -0.87
BRCA1-227ENST00000591849 IKZF3Q9UKT9 509 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms