RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 LYSMD4Q5XG99 296 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 CEACAM20Q6UY09 585 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 TMEM182Q6ZP80 229 aaPredicted RBP3.11□□□□□ -1.91
SMAD4-207ENST00000589076 MARK2Q7KZI7 788 aaKnown RBP3.11□□□□□ -1.91
SMAD4-207ENST00000589076 PIWIL3Q7Z3Z3 882 aaKnown RBP3.11□□□□□ -1.91
SMAD4-207ENST00000589076 PIGZQ86VD9 579 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 IQCA1Q86XH1 822 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 OR10Q1Q8NGQ4 319 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 AFAP1L1Q8TED9 768 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 HPSE2Q8WWQ2 592 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 RIT1Q92963 219 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 P2RX5Q93086 422 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 EXOC4Q96A65 974 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 BSCL2Q96G97 398 aaPredicted RBP3.11□□□□□ -1.91
SMAD4-207ENST00000589076 AK8Q96MA6 479 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 MAP3K3Q99759 626 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 RBM4Q9BWF3 364 aaKnown RBP3.11□□□□□ -1.91
SMAD4-207ENST00000589076 FAM49AQ9H0Q0 323 aaPredicted RBP3.11□□□□□ -1.91
SMAD4-207ENST00000589076 SDCBP2Q9H190 292 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 P4HTMQ9NXG6 502 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 PKD2L2Q9NZM6 624 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 GRID1Q9ULK0 1009 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 KCNJ14Q9UNX9 436 aa3.11□□□□□ -1.91
SMAD4-207ENST00000589076 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 YDJCA8MPS7 323 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 PMS2P5A8MQ11 134 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 TMEM150CB9EJG8 249 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 BLOC1S5-TXNDC5H3BN57 136 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 KLF11O14901 512 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 FLRT2O43155 660 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 PPIP5K2O43314 1243 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 GLRA3O75311 464 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 SUPT20HL2P0C7V6 817 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 ERVK-10P10266 1014 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 PSMB4P28070 264 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 ALDH4A1P30038 563 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 CETN2P41208 172 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 LINC01547P58512 204 aaPredicted RBP3.1□□□□□ -1.91
SMAD4-207ENST00000589076 CDR2Q01850 454 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 TRAP1Q12931 704 aaKnown RBP3.1□□□□□ -1.91
SMAD4-207ENST00000589076 P2RY6Q15077 328 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 TAZQ16635 292 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 TYSND1Q2T9J0 566 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 XKR6Q5GH73 641 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 XKR3Q5GH77 459 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 LCN1P1Q5VSP4 162 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 SUSD4Q5VX71 490 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 CASC4Q6P4E1 433 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 CYB5D1Q6P9G0 228 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 IL17RELQ6ZVW7 336 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 G2E3Q7L622 706 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 HOOK3Q86VS8 718 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 CNBD1Q8NA66 436 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 TRIM58Q8NG06 486 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 OR13C3Q8NGS6 347 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 TSACCQ96A04 125 aaPredicted RBP3.1□□□□□ -1.91
SMAD4-207ENST00000589076 ZNF524Q96C55 264 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 GIMAP5Q96F15 307 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 GDAP1L1Q96MZ0 367 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 GPATCH1Q9BRR8 931 aaKnown RBP3.1□□□□□ -1.91
SMAD4-207ENST00000589076 DNAI2Q9GZS0 605 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 TMEM206Q9H813 350 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 SIX2Q9NPC8 291 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 INTS9Q9NV88 658 aaKnown RBP3.1□□□□□ -1.91
SMAD4-207ENST00000589076 ZNF624Q9P2J8 865 aaPredicted RBP3.1□□□□□ -1.91
SMAD4-207ENST00000589076 MAN1B1Q9UKM7 699 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 C2CD2Q9Y426 696 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 DISP3Q9P2K9 1392 aa3.1□□□□□ -1.91
SMAD4-207ENST00000589076 A0A0U1RQK1 487 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 ZNF320A2RRD8 509 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 A4D1N5 150 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 SDR42E2A6NKP2 422 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 C2CD4DB7Z1M9 353 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 EPHB6O15197 1021 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 SELENOFO60613 162 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 CDK2AP2O75956 126 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 DDHD2O94830 711 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 EML2O95834 649 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 MOCS2O96007 188 aaPredicted RBP3.09□□□□□ -1.91
SMAD4-207ENST00000589076 NGFP01138 241 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 AMBPP02760 352 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 SERPING1P05155 500 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 STAG3L1P0CL83 205 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 CD27P26842 260 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 NKX2-1P43699 371 aaPredicted RBP3.09□□□□□ -1.91
SMAD4-207ENST00000589076 GCNT1Q02742 428 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 NFE2L1Q14494 772 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 SLMAPQ14BN4 828 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 TEAD2Q15562 447 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 LBHQ53QV2 105 aaPredicted RBP3.09□□□□□ -1.91
SMAD4-207ENST00000589076 ODF2Q5BJF6 829 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.09□□□□□ -1.91
SMAD4-207ENST00000589076 LCE3CQ5T5A8 94 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 FAM166AQ6J272 317 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 UGT3A1Q6NUS8 523 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 CTR9Q6PD62 1173 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 IYDQ6PHW0 289 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 GBP6Q6ZN66 633 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 OTOAQ7RTW8 1153 aa3.09□□□□□ -1.91
SMAD4-207ENST00000589076 SLC16A9Q7RTY1 509 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms