RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 MED16Q9Y2X0 877 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 PSAT1Q9Y617 370 aa11.07□□□□□ -0.64
RFX1-204ENST00000588885 PRRC2CQ9Y520 2896 aaKnown RBP11.07□□□□□ -0.64
RFX1-204ENST00000588885 NBASA2RRP1 2371 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 TLDC2A0PJX2 215 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 H3BQF6 201 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 MYO1CO00159 1063 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 MASP2O00187 686 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 CNOT3O75175 753 aaKnown RBP11.06□□□□□ -0.64
RFX1-204ENST00000588885 PSIP1O75475 530 aaKnown RBP11.06□□□□□ -0.64
RFX1-204ENST00000588885 KLF7O75840 302 aaPredicted RBP11.06□□□□□ -0.64
RFX1-204ENST00000588885 CATP04040 527 aaKnown RBP11.06□□□□□ -0.64
RFX1-204ENST00000588885 GABRB3P28472 473 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 PGGT1BP53609 377 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 BMPR2Q13873 1038 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 NKAIN1Q4KMZ8 207 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 TTMPQ5BVD1 217 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 ZC3H12BQ5HYM0 836 aaKnown RBP11.06□□□□□ -0.64
RFX1-204ENST00000588885 WASHC2DQ5SRD0 308 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 TEDDM1Q5T9Z0 273 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 FRMPD2BQ6IN97 320 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 CYHR1Q6ZMK1 362 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 APLFQ8IW19 511 aaPredicted RBP11.06□□□□□ -0.64
RFX1-204ENST00000588885 CNTN4Q8IWV2 1026 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 TEX19Q8NA77 164 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 PROKR1Q8TCW9 393 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 CD200R1Q8TD46 325 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 ASB11Q8WXH4 323 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 SMPDL3AQ92484 453 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 CDKL2Q92772 493 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 ZUFSPQ96AP4 578 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 ARL8AQ96BM9 186 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 SH3GL2Q99962 352 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 CCDC77Q9BR77 488 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 AARSD1Q9BTE6 412 aaKnown RBP11.06□□□□□ -0.64
RFX1-204ENST00000588885 SLC25A23Q9BV35 468 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 EPN3Q9H201 632 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 SLC22A11Q9NSA0 550 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 CUTCQ9NTM9 273 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 SPATA7Q9P0W8 599 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 FETUBQ9UGM5 382 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 LGALS13Q9UHV8 139 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 SRPK3Q9UPE1 567 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 PADI2Q9Y2J8 665 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 DHRS7Q9Y394 339 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 MAU2Q9Y6X3 613 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 CCDC88CQ9P219 2028 aa11.06□□□□□ -0.64
RFX1-204ENST00000588885 TARM1B6A8C7 271 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 ZBTB14O43829 449 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 VPS26AO75436 327 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 SLC16A8O95907 504 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 AHSGP02765 367 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 INHBAP08476 426 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 ITGAXP20702 1163 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 CMPK1P30085 196 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 GP5P40197 560 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 FOLR3P41439 243 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 MSH2P43246 934 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 OR1D4P47884 311 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 PNLIPRP1P54315 467 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 CDKN2DP55273 166 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 TIAL1Q01085 375 aaKnown RBP eCLIP11.05□□□□□ -0.64
RFX1-204ENST00000588885 KLRB1Q12918 225 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 GRM7Q14831 915 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 RBM20Q5T481 1227 aaKnown RBP11.05□□□□□ -0.64
RFX1-204ENST00000588885 THEMIS2Q5TEJ8 643 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 TCTN3Q6NUS6 607 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 FBXO42Q6P3S6 717 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 SHISA6Q6ZSJ9 500 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 UBE2R2Q712K3 238 aaPredicted RBP11.05□□□□□ -0.64
RFX1-204ENST00000588885 CYS1Q717R9 158 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 SLC26A11Q86WA9 606 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 TDRPQ86YL5 185 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 LMNTD2Q8IXW0 634 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 TTC29Q8NA56 475 aaPredicted RBP11.05□□□□□ -0.64
RFX1-204ENST00000588885 C2CD4AQ8NCU7 369 aaPredicted RBP11.05□□□□□ -0.64
RFX1-204ENST00000588885 HMGCLL1Q8TB92 370 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 ZNF480Q8WV37 535 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 EEF1AKMT1Q8WVE0 214 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 DLG3Q92796 817 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 KCNJ9Q92806 393 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 COL26A1Q96A83 441 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 ROPN1BQ9BZX4 212 aaPredicted RBP11.05□□□□□ -0.64
RFX1-204ENST00000588885 CENPHQ9H3R5 247 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 ROPN1Q9HAT0 212 aaPredicted RBP11.05□□□□□ -0.64
RFX1-204ENST00000588885 TMBIM4Q9HC24 238 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 SLC6A20Q9NP91 592 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 MRPS30Q9NP92 439 aaKnown RBP11.05□□□□□ -0.64
RFX1-204ENST00000588885 TBK1Q9UHD2 729 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 TAC3Q9UHF0 121 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 TRMT6Q9UJA5 497 aaKnown RBP11.05□□□□□ -0.64
RFX1-204ENST00000588885 ANAPC2Q9UJX6 822 aa11.05□□□□□ -0.64
RFX1-204ENST00000588885 SPENQ96T58 3664 aaKnown RBP11.05□□□□□ -0.64
RFX1-204ENST00000588885 A0A1B0GX78 115 aa11.04□□□□□ -0.64
RFX1-204ENST00000588885 HYKKA2RU49 373 aa11.04□□□□□ -0.64
RFX1-204ENST00000588885 GOLGA6L10A6NI86 522 aa11.04□□□□□ -0.64
RFX1-204ENST00000588885 FOXO6A8MYZ6 492 aa11.04□□□□□ -0.64
RFX1-204ENST00000588885 RGS16O15492 202 aaPredicted RBP11.04□□□□□ -0.64
RFX1-204ENST00000588885 CDH16O75309 829 aa11.04□□□□□ -0.64
RFX1-204ENST00000588885 MED26O95402 600 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms