RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 PABPN1LA6NDY0 278 aaKnown RBP16.87■□□□□ 0.29
TPM4-206ENST00000587201 E7ESA3 106 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 H7BY64 318 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 AGPSO00116 658 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 HAT1O14929 419 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 DPM1O60762 260 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 FDXRP22570 491 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 MMP11P24347 488 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 PGGT1BP53609 377 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 EMP3P54852 163 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 MLLT10P55197 1068 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 RELAQ04206 551 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 OCA2Q04671 838 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 MGAT5Q09328 741 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 CALCOCO2Q13137 446 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 FRG1Q14331 258 aaKnown RBP16.87■□□□□ 0.29
TPM4-206ENST00000587201 HKDC1Q2TB90 917 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 NADK2Q4G0N4 442 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 AGTRAPQ6RW13 159 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 MAATS1Q7Z4T9 603 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 PLD3Q8IV08 490 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 ZBED8Q8IZ13 594 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 GALNT16Q8N428 558 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 SPATA4Q8NEY3 305 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 NACC2Q96BF6 587 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 MIEF2Q96C03 454 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 PRAP1Q96NZ9 151 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 OLFM1Q99784 485 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 PCBD2Q9H0N5 130 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 ATG10Q9H0Y0 220 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 SYNPO2LQ9H987 977 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 TMEM184CQ9NVA4 438 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 CDC14AQ9UNH5 594 aa16.87■□□□□ 0.29
TPM4-206ENST00000587201 VSTM2BA6NLU5 285 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 MASP2O00187 686 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 TXNDC9O14530 226 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 RAD51CO43502 376 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 TSPAN12O95859 305 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 SAT1P21673 171 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 FBLP22087 321 aaKnown RBP16.86■□□□□ 0.29
TPM4-206ENST00000587201 HRH2P25021 359 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 FOXK1P85037 733 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 C2orf54Q08AI8 447 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 NAE1Q13564 534 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 RBBP7Q16576 425 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 PHKG1Q16816 387 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 SYT10Q6XYQ8 523 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 CAPN12Q6ZSI9 719 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 STRA8Q7Z7C7 330 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 HPS6Q86YV9 775 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 SMAD5Q99717 465 aaKnown RBP16.86■□□□□ 0.29
TPM4-206ENST00000587201 ERP44Q9BS26 406 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 YIPF2Q9BWQ6 316 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 TRIM54Q9BYV2 358 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 ATP13A2Q9NQ11 1180 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 SEMA3GQ9NS98 782 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 ZNF282Q9UDV7 671 aaPredicted RBP16.86■□□□□ 0.29
TPM4-206ENST00000587201 PSAT1Q9Y617 370 aa16.86■□□□□ 0.29
TPM4-206ENST00000587201 SPENQ96T58 3664 aaKnown RBP16.85■□□□□ 0.29
TPM4-206ENST00000587201 TTLL8A6PVC2 850 aa16.85■□□□□ 0.29
TPM4-206ENST00000587201 PRPF4O43172 522 aaKnown RBP eCLIP16.85■□□□□ 0.292e-10■■□□□ 13.2
TPM4-206ENST00000587201 CCND1P24385 295 aa16.85■□□□□ 0.29
TPM4-206ENST00000587201 ETF1P62495 437 aaKnown RBP16.85■□□□□ 0.29
TPM4-206ENST00000587201 KLC1Q07866 573 aa16.85■□□□□ 0.29
TPM4-206ENST00000587201 VWA5B1Q5TIE3 1220 aa16.85■□□□□ 0.29
TPM4-206ENST00000587201 GARNL3Q5VVW2 1013 aa16.85■□□□□ 0.29
TPM4-206ENST00000587201 C17orf64Q86WR6 236 aa16.85■□□□□ 0.29
TPM4-206ENST00000587201 PRSS58Q8IYP2 241 aa16.85■□□□□ 0.29
TPM4-206ENST00000587201 STT3BQ8TCJ2 826 aa16.85■□□□□ 0.29
TPM4-206ENST00000587201 PYROXD1Q8WU10 500 aa16.85■□□□□ 0.29
TPM4-206ENST00000587201 MVB12AQ96EY5 273 aa16.85■□□□□ 0.29
TPM4-206ENST00000587201 MMABQ96EY8 250 aaPredicted RBP16.85■□□□□ 0.29
TPM4-206ENST00000587201 CRB3Q9BUF7 120 aa16.85■□□□□ 0.29
TPM4-206ENST00000587201 MFRPQ9BY79 579 aa16.85■□□□□ 0.29
TPM4-206ENST00000587201 ARL15Q9NXU5 204 aa16.85■□□□□ 0.29
TPM4-206ENST00000587201 MOCS1Q9NZB8 636 aa16.85■□□□□ 0.29
TPM4-206ENST00000587201 WHRNQ9P202 907 aa16.85■□□□□ 0.29
TPM4-206ENST00000587201 C5AR2Q9P296 337 aa16.85■□□□□ 0.29
TPM4-206ENST00000587201 FBXL4Q9UKA2 621 aa16.85■□□□□ 0.29
TPM4-206ENST00000587201 HS3ST3B1Q9Y662 390 aa16.85■□□□□ 0.29
TPM4-206ENST00000587201 TENM4Q6N022 2769 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 HEATR5BQ9P2D3 2071 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 FAM95CA0A1B0GW59 222 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 SOCS6O14544 535 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 P2RX6O15547 441 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 KLHL41O60662 606 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 ALPPP05187 535 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 ANXA5P08758 320 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 ZGLP1P0C6A0 271 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 ITGA3P26006 1051 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 AP1S2P56377 157 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 RPS15AP62244 130 aaKnown RBP16.84■□□□□ 0.29
TPM4-206ENST00000587201 AIMP2Q13155 320 aaKnown RBP16.84■□□□□ 0.29
TPM4-206ENST00000587201 MYBPC3Q14896 1274 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 NDUFA9Q16795 377 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 VWA2Q5GFL6 755 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 CAPN13Q6MZZ7 669 aaPredicted RBP16.84■□□□□ 0.29
TPM4-206ENST00000587201 LCTLQ6UWM7 567 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 SLC26A11Q86WA9 606 aa16.84■□□□□ 0.29
TPM4-206ENST00000587201 ZC3HC1Q86WB0 502 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms