RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 ZIC1Q15915 447 aa13.08□□□□□ -0.32
VMP1-203ENST00000586245 XKR6Q5GH73 641 aa13.08□□□□□ -0.32
VMP1-203ENST00000586245 CATSPEREQ5SY80 951 aa13.08□□□□□ -0.32
VMP1-203ENST00000586245 ATG9BQ674R7 924 aa13.08□□□□□ -0.32
VMP1-203ENST00000586245 ZNF425Q6IV72 752 aa13.08□□□□□ -0.32
VMP1-203ENST00000586245 CYB5D1Q6P9G0 228 aa13.08□□□□□ -0.32
VMP1-203ENST00000586245 SLCO4C1Q6ZQN7 724 aa13.08□□□□□ -0.32
VMP1-203ENST00000586245 RPS27LQ71UM5 84 aaKnown RBP13.08□□□□□ -0.32
VMP1-203ENST00000586245 TMPRSS7Q7RTY8 843 aa13.08□□□□□ -0.32
VMP1-203ENST00000586245 PAQR7Q86WK9 346 aa13.08□□□□□ -0.32
VMP1-203ENST00000586245 FAM129CQ86XR2 697 aa13.08□□□□□ -0.32
VMP1-203ENST00000586245 KRT78Q8N1N4 520 aa13.08□□□□□ -0.32
VMP1-203ENST00000586245 D2HGDHQ8N465 521 aa13.08□□□□□ -0.32
VMP1-203ENST00000586245 TRPC4APQ8TEL6 797 aa13.08□□□□□ -0.32
VMP1-203ENST00000586245 NSUN5Q96P11 429 aaKnown RBP13.08□□□□□ -0.32
VMP1-203ENST00000586245 AIF1LQ9BQI0 150 aa13.08□□□□□ -0.32
VMP1-203ENST00000586245 EFCAB11Q9BUY7 163 aa13.08□□□□□ -0.32
VMP1-203ENST00000586245 CHRNA10Q9GZZ6 450 aa13.08□□□□□ -0.32
VMP1-203ENST00000586245 EHD1Q9H4M9 534 aa13.08□□□□□ -0.32
VMP1-203ENST00000586245 NOL11Q9H8H0 719 aaKnown RBP13.08□□□□□ -0.32
VMP1-203ENST00000586245 ACTR8Q9H981 624 aa13.08□□□□□ -0.32
VMP1-203ENST00000586245 FANCEQ9HB96 536 aa13.08□□□□□ -0.32
VMP1-203ENST00000586245 SEMA4BQ9NPR2 832 aaPredicted RBP13.08□□□□□ -0.32
VMP1-203ENST00000586245 CCDC187A0A096LP49 1063 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 EFCAB7A8K855 629 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 HAT1O14929 419 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 PRAMEF10O60809 474 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 OTCP00480 354 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 EZRP15311 586 aaKnown RBP13.07□□□□□ -0.32
VMP1-203ENST00000586245 TSPAN8P19075 237 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 EPORP19235 508 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 VARSP26640 1264 aaKnown RBP13.07□□□□□ -0.32
VMP1-203ENST00000586245 EIF3IQ13347 325 aaKnown RBP13.07□□□□□ -0.32
VMP1-203ENST00000586245 LAPTM5Q13571 262 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 DOC2AQ14183 400 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 SLBPQ14493 270 aaKnown RBP eCLIP13.07□□□□□ -0.32
VMP1-203ENST00000586245 KCNAB1Q14722 419 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 TBCCQ15814 346 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 HIST2H2ACQ16777 129 aaPredicted RBP13.07□□□□□ -0.32
VMP1-203ENST00000586245 PAGE2BQ5JRK9 111 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 HIST2H2AA3Q6FI13 130 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 FRMD7Q6ZUT3 714 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 RAB11FIP2Q7L804 512 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 DGLUCYQ7Z3D6 616 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 MILR1Q7Z6M3 343 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 MYLK4Q86YV6 388 aaPredicted RBP13.07□□□□□ -0.32
VMP1-203ENST00000586245 ARFGAP2Q8N6H7 521 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 OR4K1Q8NGD4 311 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 PTCD3Q96EY7 689 aaKnown RBP13.07□□□□□ -0.32
VMP1-203ENST00000586245 MAGEB10Q96LZ2 347 aaPredicted RBP13.07□□□□□ -0.32
VMP1-203ENST00000586245 ZFYVE21Q9BQ24 234 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 GATA5Q9BWX5 397 aaPredicted RBP13.07□□□□□ -0.32
VMP1-203ENST00000586245 DRC3Q9H069 523 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 GSTO2Q9H4Y5 243 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 PRM3Q9NNZ6 103 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 FAM60AQ9NP50 221 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 ACSS2Q9NR19 701 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 LOXL2Q9Y4K0 774 aa13.07□□□□□ -0.32
VMP1-203ENST00000586245 A0A0J9YVX5 310 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 FEZF1A0PJY2 475 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 FAM149AA5PLN7 773 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 OR7A17O14581 309 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 NPHS1O60500 1241 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 UGDHO60701 494 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 CLDN9O95484 217 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 SERPINE1P05121 402 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 JMJD7P0C870 316 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 EBLN1P0CF75 366 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 FOLR1P15328 257 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 SERPINB5P36952 375 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 HNF4AP41235 474 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 CASP2P42575 452 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 WDR4P57081 412 aaKnown RBP13.06□□□□□ -0.32
VMP1-203ENST00000586245 RPS15AP62244 130 aaKnown RBP13.06□□□□□ -0.32
VMP1-203ENST00000586245 REEP5Q00765 189 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 MEF2AQ02078 507 aaPredicted RBP13.06□□□□□ -0.32
VMP1-203ENST00000586245 RELAQ04206 551 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 FOXM1Q08050 763 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 PCDH1Q08174 1060 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 FOXC1Q12948 553 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 LCP2Q13094 533 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 TUBB3Q13509 450 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 RBBP5Q15291 538 aaKnown RBP13.06□□□□□ -0.32
VMP1-203ENST00000586245 CHI3L2Q15782 390 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 LIPJQ5W064 366 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 GRHL2Q6ISB3 625 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 ZCCHC23Q6ZST2 131 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 RNF44Q7L0R7 432 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 TRIM42Q8IWZ5 723 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 DNAJC22Q8N4W6 341 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 WDR36Q8NI36 951 aaKnown RBP13.06□□□□□ -0.32
VMP1-203ENST00000586245 MDM1Q8TC05 714 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 DYDC1Q8WWB3 177 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 UBE2E3Q969T4 207 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 MOCOSQ96EN8 888 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 WDR34Q96EX3 536 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 CNDP1Q96KN2 507 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 TRMOQ9BU70 441 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 NTMT1Q9BV86 223 aa13.06□□□□□ -0.32
VMP1-203ENST00000586245 PITHD1Q9GZP4 211 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms