RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.73□□□□□ -0.21
SDF2-202ENST00000585428 FAAH2Q6GMR7 532 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 KIAA1328Q86T90 577 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 SLC13A5Q86YT5 568 aaPredicted RBP13.73□□□□□ -0.21
SDF2-202ENST00000585428 TMEM139Q8IV31 216 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 CSNK1A1LQ8N752 337 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 LPGAT1Q92604 370 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 MMABQ96EY8 250 aaPredicted RBP13.73□□□□□ -0.21
SDF2-202ENST00000585428 CCDC120Q96HB5 630 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 TCF12Q99081 682 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 KIFC1Q9BW19 673 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 YIPF2Q9BWQ6 316 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 IL22Q9GZX6 179 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.73□□□□□ -0.214e-6■□□□□ 8.7
SDF2-202ENST00000585428 RIC8BQ9NVN3 520 aa13.73□□□□□ -0.21
SDF2-202ENST00000585428 ARHGEF33A8MVX0 844 aa13.72□□□□□ -0.21
SDF2-202ENST00000585428 CCL21O00585 134 aa13.72□□□□□ -0.21
SDF2-202ENST00000585428 VPS26AO75436 327 aa13.72□□□□□ -0.21
SDF2-202ENST00000585428 MYBL2P10244 700 aa13.72□□□□□ -0.21
SDF2-202ENST00000585428 PKMP14618 531 aaKnown RBP13.72□□□□□ -0.21
SDF2-202ENST00000585428 HSD17B2P37059 387 aa13.72□□□□□ -0.21
SDF2-202ENST00000585428 CA7P43166 264 aa13.72□□□□□ -0.21
SDF2-202ENST00000585428 EIF3BP55884 814 aaKnown RBP13.72□□□□□ -0.21
SDF2-202ENST00000585428 SNRPNP63162 240 aaKnown RBP13.72□□□□□ -0.21
SDF2-202ENST00000585428 SRSF11Q05519 484 aaKnown RBP13.72□□□□□ -0.21
SDF2-202ENST00000585428 EEF1A2Q05639 463 aaKnown RBP13.72□□□□□ -0.21
SDF2-202ENST00000585428 SNX1Q13596 522 aa13.72□□□□□ -0.21
SDF2-202ENST00000585428 ZNF630Q2M218 657 aaPredicted RBP13.72□□□□□ -0.21
SDF2-202ENST00000585428 TYSND1Q2T9J0 566 aa13.72□□□□□ -0.21
SDF2-202ENST00000585428 H3F3CQ6NXT2 135 aa13.72□□□□□ -0.21
SDF2-202ENST00000585428 BNC2Q6ZN30 1099 aaPredicted RBP13.72□□□□□ -0.21
SDF2-202ENST00000585428 MRGPRGQ86SM5 289 aa13.72□□□□□ -0.21
SDF2-202ENST00000585428 SDCCAG8Q86SQ7 713 aaPredicted RBP13.72□□□□□ -0.21
SDF2-202ENST00000585428 ZNF808Q8N4W9 903 aaPredicted RBP13.72□□□□□ -0.21
SDF2-202ENST00000585428 RNF10Q8N5U6 811 aaKnown RBP13.72□□□□□ -0.21
SDF2-202ENST00000585428 MFSD3Q96ES6 412 aa13.72□□□□□ -0.21
SDF2-202ENST00000585428 CYTH2Q99418 400 aa13.72□□□□□ -0.21
SDF2-202ENST00000585428 PKP4Q99569 1192 aa13.72□□□□□ -0.21
SDF2-202ENST00000585428 CHST11Q9NPF2 352 aa13.72□□□□□ -0.21
SDF2-202ENST00000585428 EIF2B3Q9NR50 452 aaKnown RBP13.72□□□□□ -0.21
SDF2-202ENST00000585428 SEC14L3Q9UDX4 400 aa13.72□□□□□ -0.21
SDF2-202ENST00000585428 MKL2Q9ULH7 1088 aa13.72□□□□□ -0.21
SDF2-202ENST00000585428 DRG1Q9Y295 367 aaKnown RBP13.72□□□□□ -0.21
SDF2-202ENST00000585428 CNTRLQ7Z7A1 2325 aa13.72□□□□□ -0.21
SDF2-202ENST00000585428 A0A0A6YYC8 382 aaPredicted RBP13.71□□□□□ -0.21
SDF2-202ENST00000585428 TRGV8A0A0C4DH27 118 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 OR5H15A6NDH6 313 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 H3BMM5 538 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 I3L1I5 382 aaPredicted RBP13.71□□□□□ -0.21
SDF2-202ENST00000585428 AP3B1O00203 1094 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 TXNDC9O14530 226 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 PRAMEF2O60811 474 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 NIPSNAP2O75323 286 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 VAPBO95292 243 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 ESR1P03372 595 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 EZRP15311 586 aaKnown RBP13.71□□□□□ -0.21
SDF2-202ENST00000585428 HTR1EP28566 365 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 RPA3P35244 121 aaPredicted RBP13.71□□□□□ -0.21
SDF2-202ENST00000585428 PTGER4P35408 488 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 AP2B1P63010 937 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 SIX1Q15475 284 aaPredicted RBP13.71□□□□□ -0.21
SDF2-202ENST00000585428 CCNG2Q16589 344 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 SYT16Q17RD7 645 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 KLHL38Q2WGJ6 581 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 ACSBG2Q5FVE4 666 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 ICE2Q659A1 982 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 MRNIPQ6NTE8 343 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 HIBCHQ6NVY1 386 aaPredicted RBP13.71□□□□□ -0.21
SDF2-202ENST00000585428 MTFR2Q6P444 385 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 DRICH1Q6PGQ1 229 aaPredicted RBP13.71□□□□□ -0.21
SDF2-202ENST00000585428 C4orf22Q6V702 233 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 ZC3H7AQ8IWR0 971 aaKnown RBP13.71□□□□□ -0.21
SDF2-202ENST00000585428 LRRC56Q8IYG6 542 aaPredicted RBP13.71□□□□□ -0.21
SDF2-202ENST00000585428 CCDC89Q8N998 374 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 BAG1Q99933 345 aaPredicted RBP13.71□□□□□ -0.21
SDF2-202ENST00000585428 TUBB6Q9BUF5 446 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 DRC3Q9H069 523 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 BFARQ9NZS9 450 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 PCDHGB6Q9Y5F9 930 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 CAPN6Q9Y6Q1 641 aa13.71□□□□□ -0.21
SDF2-202ENST00000585428 CSMD2Q7Z408 3487 aa13.7□□□□□ -0.22
SDF2-202ENST00000585428 DIDO1Q9BTC0 2240 aaKnown RBP13.7□□□□□ -0.22
SDF2-202ENST00000585428 E7ENX8 843 aa13.7□□□□□ -0.22
SDF2-202ENST00000585428 SLC16A8O95907 504 aa13.7□□□□□ -0.22
SDF2-202ENST00000585428 ANXA5P08758 320 aa13.7□□□□□ -0.22
SDF2-202ENST00000585428 CHRM3P20309 590 aa13.7□□□□□ -0.22
SDF2-202ENST00000585428 PNLIPRP1P54315 467 aa13.7□□□□□ -0.22
SDF2-202ENST00000585428 ABATP80404 500 aa13.7□□□□□ -0.22
SDF2-202ENST00000585428 TAP2Q03519 686 aa13.7□□□□□ -0.22
SDF2-202ENST00000585428 ABHD17BQ5VST6 288 aa13.7□□□□□ -0.22
SDF2-202ENST00000585428 XKRXQ6PP77 449 aa13.7□□□□□ -0.22
SDF2-202ENST00000585428 CES3Q6UWW8 571 aa13.7□□□□□ -0.22
SDF2-202ENST00000585428 SHISA5Q8N114 240 aa13.7□□□□□ -0.22
SDF2-202ENST00000585428 FBXO15Q8NCQ5 510 aaPredicted RBP13.7□□□□□ -0.22
SDF2-202ENST00000585428 SUN3Q8TAQ9 357 aa13.7□□□□□ -0.22
SDF2-202ENST00000585428 ADAMTS18Q8TE60 1221 aa13.7□□□□□ -0.22
SDF2-202ENST00000585428 ZNF480Q8WV37 535 aa13.7□□□□□ -0.22
SDF2-202ENST00000585428 RERGQ96A58 199 aaPredicted RBP13.7□□□□□ -0.22
SDF2-202ENST00000585428 VN1R1Q9GZP7 353 aa13.7□□□□□ -0.22
SDF2-202ENST00000585428 UTP6Q9NYH9 597 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms