RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 IDSB3KWA1 339 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 H0YGG7 62 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 MYO1CO00159 1063 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 SMAPO00193 183 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 E2F3O00716 465 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 TXNDC9O14530 226 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 FFAR3O14843 346 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 PCDH17O14917 1159 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 GPR42O15529 346 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 PSIP1O75475 530 aaKnown RBP8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 MED26O95402 600 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 HEXBP07686 556 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 COL8A1P27658 744 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 DCTP40126 519 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 FNTAP49354 379 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 EMP3P54852 163 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ARF3P61204 181 aaPredicted RBP8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 AP2B1P63010 937 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 GPS1Q13098 491 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CUL1Q13616 776 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 THOC5Q13769 683 aaKnown RBP8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 DHX34Q14147 1143 aaKnown RBP8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 GBX1Q14549 363 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 PPP1R7Q15435 360 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 TRIP13Q15645 432 aaPredicted RBP8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CYP1B1Q16678 543 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 NDUFA9Q16795 377 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 HKDC1Q2TB90 917 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ACSBG2Q5FVE4 666 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 MFSD4BQ5TF39 518 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 GARNL3Q5VVW2 1013 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ARMC3Q5W041 872 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ZNF787Q6DD87 383 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 KCNMB4Q86W47 210 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CILP2Q8IUL8 1156 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 OR4N4Q8N0Y3 316 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 BCORP1Q8N888 145 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 PPFIBP2Q8ND30 876 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 SUN3Q8TAQ9 357 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 FAR1Q8WVX9 515 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 KRT12Q99456 494 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 BARD1Q99728 777 aaKnown RBP8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 PLCD4Q9BRC7 762 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 DRC3Q9H069 523 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 DDX47Q9H0S4 455 aaKnown RBP8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 MKKSQ9NPJ1 570 aaPredicted RBP8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 OLAHQ9NV23 265 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 PTGFRNQ9P2B2 879 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 OSGIN2Q9Y236 505 aa8.29□□□□□ -1.08
CDK5RAP3-229ENST00000583697 IGHV1-45A0A0A0MS14 117 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 TCRBV7S3A2A0A539 114 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 PABPN1LA6NDY0 278 aaKnown RBP8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 WIPF3A6NGB9 483 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 LRRTM2O43300 516 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 SLC16A8O95907 504 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 PRR35P0CG20 571 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 MPC1LP0DKB6 136 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 COX6A1P12074 109 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ENO3P13929 434 aaPredicted RBP8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 AVPR1BP47901 424 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 EMP2P54851 167 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 TBPL1P62380 186 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 YBX1P67809 324 aaKnown RBP8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ABATP80404 500 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 DR1Q01658 176 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 Q0VFX4 171 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 KCNJ11Q14654 390 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 NAA30Q147X3 362 aaPredicted RBP8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 PRTGQ2VWP7 1150 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 FAAH2Q6GMR7 532 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 LRRC8EQ6NSJ5 796 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 NEPROQ6NW34 567 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 RPUSD3Q6P087 351 aaKnown RBP8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 SYDE1Q6ZW31 735 aaPredicted RBP8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 NEK10Q6ZWH5 1172 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CENPUQ71F23 418 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 NDUFAF7Q7L592 441 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 PAQR7Q86WK9 346 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 LMNTD2Q8IXW0 634 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 SIRT6Q8N6T7 355 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 OR1N1Q8NGS0 311 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 BRIX1Q8TDN6 353 aaKnown RBP8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 KCNJ9Q92806 393 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 LMF1Q96S06 567 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 PKP4Q99569 1192 aa8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 EBNA1BP2Q99848 306 aaKnown RBP8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CCDC177Q9NQR7 707 aaPredicted RBP8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 FBXO6Q9NRD1 293 aaPredicted RBP8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 STOX2Q9P2F5 926 aaPredicted RBP8.28□□□□□ -1.08
CDK5RAP3-229ENST00000583697 FLNCQ14315 2725 aa8.27□□□□□ -1.09
CDK5RAP3-229ENST00000583697 MAST4O15021 2626 aa8.27□□□□□ -1.09
CDK5RAP3-229ENST00000583697 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.27□□□□□ -1.09
CDK5RAP3-229ENST00000583697 A0A0A6YYC8 382 aaPredicted RBP8.27□□□□□ -1.09
CDK5RAP3-229ENST00000583697 TRAV17A0A0B4J275 112 aa8.27□□□□□ -1.09
CDK5RAP3-229ENST00000583697 IGKV1-8A0A0C4DH67 115 aa8.27□□□□□ -1.09
CDK5RAP3-229ENST00000583697 A0A1B0GUH1 482 aa8.27□□□□□ -1.09
CDK5RAP3-229ENST00000583697 FAM237BA0A1B0GVD1 139 aa8.27□□□□□ -1.09
CDK5RAP3-229ENST00000583697 ENO4A6NNW6 628 aa8.27□□□□□ -1.09
CDK5RAP3-229ENST00000583697 I3L1I5 382 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms