RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 TSFMP43897 325 aaKnown RBP2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 LHX1P48742 406 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 CCR3P51677 355 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 VAMP7P51809 220 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 TMEM50BP56557 158 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 IFI35P80217 286 aaPredicted RBP2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 CDH18Q13634 790 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 SNTB1Q13884 538 aaKnown RBP2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 TMEM132DQ14C87 1099 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 GPR33Q49SQ1 333 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 LEKR1Q6ZMV7 388 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 CENPVQ7Z7K6 275 aaPredicted RBP2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 NDUFAF2Q8N183 169 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 C11orf45Q8TAV5 145 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 MIPOL1Q8TD10 442 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 ARSGQ96EG1 525 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 LINC00615Q96LM1 132 aaPredicted RBP2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 CPNE1Q99829 537 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 SLC2A11Q9BYW1 496 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 MTMR12Q9C0I1 747 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 GPR83Q9NYM4 423 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 ANAPC2Q9UJX6 822 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 CHKBQ9Y259 395 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 TRBV5-5A0A0J9YX44 114 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 EDDM13A0A1B0GTR0 161 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 A0A1W2PPK0 400 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 TCRBV21S2A2A0A5A6 115 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 H0YAE9 185 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 CCL24O00175 119 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 O00370 1275 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 PTGESO14684 152 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 TADA2AO75478 443 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 PSMD10O75832 226 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 ATP1B1P05026 303 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 ATP5BP06576 529 aaKnown RBP2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 NR2F1P10589 423 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 MC5RP33032 325 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 PCGF2P35227 344 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 SOX3P41225 446 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 CASP2P42575 452 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 ALDH3A2P51648 485 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 POLR2LP62875 67 aaKnown RBP2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 MYL7Q01449 175 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 PAX8Q06710 450 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 TRAP1Q12931 704 aaKnown RBP2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 RALGDSQ12967 914 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 LY6DQ14210 128 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 MTHFSDQ2M296 383 aaKnown RBP2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 OR4A47Q6IF82 309 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 RAPH1Q70E73 1250 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 ENOSF1Q7L5Y1 443 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 TTC30BQ8N4P2 665 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 POM121L12Q8N7R1 296 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 OTUB1Q96FW1 271 aaPredicted RBP2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 AGAP4Q96P64 663 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 CDH20Q9HBT6 801 aa2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 PIH1D3Q9NQM4 214 aaKnown RBP2.67□□□□□ -1.98
SMCHD1-206ENST00000581631 CASTOR2A6NHX0 329 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 CSN3P07498 182 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 SAGP10523 405 aaPredicted RBP2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 GP1BBP13224 206 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 ALDH1B1P30837 517 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 ASCL1P50553 236 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 ALCAMQ13740 583 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 TRIM29Q14134 588 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 BECN1Q14457 450 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 PTPRCAPQ14761 206 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 PTPN14Q15678 1187 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 NPTX1Q15818 432 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 DMKNQ6E0U4 476 aaPredicted RBP2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 CFAP161Q6P656 301 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 NOTUMQ6P988 496 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 FRRS1Q6ZNA5 592 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 DET1Q7L5Y6 550 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 IQCHQ86VS3 1027 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 POGLUT1Q8NBL1 392 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 NOA1Q8NC60 698 aaKnown RBP2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 KCNE4Q8WWG9 221 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 CNRIP1Q96F85 164 aaPredicted RBP2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 ATXN7L3BQ96GX2 97 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 C2orf48Q96LS8 159 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 FAM218AQ96MZ4 157 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 MUS81Q96NY9 551 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 FEVQ99581 238 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 MAP3K3Q99759 626 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 NUDT16L1Q9BRJ7 211 aaKnown RBP2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 B3GAT2Q9NPZ5 323 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 NDE1Q9NXR1 346 aa2.66□□□□□ -1.98
SMCHD1-206ENST00000581631 TRBV4-1A0A0J9YWV2 114 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 TRBC2A0A5B9 178 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 ASB14A6NK59 587 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 AP5Z1O43299 807 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 SLCO2B1O94956 709 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 CELF2O95319 508 aaKnown RBP2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 GSRP00390 522 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 EPCAMP16422 314 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 PDHA2P29803 388 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 CAPZA2P47755 286 aa2.65□□□□□ -1.99
SMCHD1-206ENST00000581631 OR3A2P47893 321 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms