RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 EBNA1BP2Q99848 306 aaKnown RBP15.12■□□□□ 0.01
CRLF3-203ENST00000578692 YIPF2Q9BWQ6 316 aa15.12■□□□□ 0.01
CRLF3-203ENST00000578692 SYNPO2LQ9H987 977 aa15.12■□□□□ 0.01
CRLF3-203ENST00000578692 LRRC4CQ9HCJ2 640 aa15.12■□□□□ 0.01
CRLF3-203ENST00000578692 PCYOX1Q9UHG3 505 aa15.12■□□□□ 0.01
CRLF3-203ENST00000578692 TRMT6Q9UJA5 497 aaKnown RBP15.12■□□□□ 0.01
CRLF3-203ENST00000578692 DOPEY2Q9Y3R5 2298 aa15.12■□□□□ 0.01
CRLF3-203ENST00000578692 SHANK1Q9Y566 2161 aa15.12■□□□□ 0.01
CRLF3-203ENST00000578692 HEATR5BQ9P2D3 2071 aa15.12■□□□□ 0.01
CRLF3-203ENST00000578692 H7BY64 318 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 PRPF4O43172 522 aaKnown RBP eCLIP15.11■□□□□ 0.01
CRLF3-203ENST00000578692 AGFG2O95081 481 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 TTC4O95801 387 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 GP1BBP13224 206 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 IMPA1P29218 277 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 GLRBP48167 497 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 EIF2S3LQ2VIR3 472 aaKnown RBP15.11■□□□□ 0.01
CRLF3-203ENST00000578692 ATG9BQ674R7 924 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 LRRC8EQ6NSJ5 796 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 MCOLN3Q8TDD5 553 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 EEF1AKMT1Q8WVE0 214 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 SLCO2A1Q92959 643 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 MMABQ96EY8 250 aaPredicted RBP15.11■□□□□ 0.01
CRLF3-203ENST00000578692 THOC3Q96J01 351 aaKnown RBP15.11■□□□□ 0.01
CRLF3-203ENST00000578692 PRAP1Q96NZ9 151 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 NDNQ99608 321 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 NAT9Q9BTE0 207 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 LHPPQ9H008 270 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 ASF1BQ9NVP2 202 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 TAS2R13Q9NYV9 303 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 TRPC4Q9UBN4 977 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 C3orf18Q9UK00 162 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 MDC1Q14676 2089 aaKnown RBP15.11■□□□□ 0.01
CRLF3-203ENST00000578692 HAT1O14929 419 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 BANF1O75531 89 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 AHSGP02765 367 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 ACPPP15309 386 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 TCP1P17987 556 aaKnown RBP15.11■□□□□ 0.01
CRLF3-203ENST00000578692 HRH2P25021 359 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 GABRB3P28472 473 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 SLC26A3P40879 764 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 RGS4P49798 205 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 EMP2P54851 167 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 TIAL1Q01085 375 aaKnown RBP eCLIP15.11■□□□□ 0.01
CRLF3-203ENST00000578692 MRPL49Q13405 166 aaKnown RBP15.11■□□□□ 0.01
CRLF3-203ENST00000578692 DSG2Q14126 1118 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 MSS51Q4VC12 460 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 SPANXN3Q5MJ09 141 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 IGFL2Q6UWQ7 119 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 PLD3Q8IV08 490 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 PALM2Q8IXS6 379 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 CCDC138Q96M89 665 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 MESP1Q9BRJ9 268 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 KCNF1Q9H3M0 494 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 TMEM184CQ9NVA4 438 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 CUEDC1Q9NWM3 386 aaPredicted RBP15.11■□□□□ 0.01
CRLF3-203ENST00000578692 ADAMTS6Q9UKP5 1117 aa15.11■□□□□ 0.01
CRLF3-203ENST00000578692 COPG1Q9Y678 874 aaKnown RBP15.11■□□□□ 0.01
CRLF3-203ENST00000578692 DOCK10Q96BY6 2186 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 HECTD1Q9ULT8 2610 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 MAP2K7O14733 419 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 FOXS1O43638 330 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 HPP00738 406 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 C8GP07360 202 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 ANXA5P08758 320 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 CXCR2P25025 360 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 IVDP26440 423 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 Q0VFX4 171 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 FAM53BQ14153 422 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 HIF1AQ16665 826 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 BBS9Q3SYG4 887 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 CRB2Q5IJ48 1285 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 PAQR3Q6TCH7 311 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 CUZD1Q86UP6 607 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 IGDCC3Q8IVU1 814 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 ARHGEF39Q8N4T4 335 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 PRR7Q8TB68 274 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 DNAJB14Q8TBM8 379 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 PPP4R1Q8TF05 950 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 C8orf44Q96CB5 159 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 WDR77Q9BQA1 342 aaPredicted RBP15.1■□□□□ 0.01
CRLF3-203ENST00000578692 DRC3Q9H069 523 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 PARVBQ9HBI1 364 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 ZNF160Q9HCG1 818 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 MKKSQ9NPJ1 570 aaPredicted RBP15.1■□□□□ 0.01
CRLF3-203ENST00000578692 CCDC177Q9NQR7 707 aaPredicted RBP15.1■□□□□ 0.01
CRLF3-203ENST00000578692 PDE10AQ9Y233 779 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 CSAG2Q9Y5P2 127 aa15.1■□□□□ 0.01
CRLF3-203ENST00000578692 FLNCQ14315 2725 aa15.09■□□□□ 0.01
CRLF3-203ENST00000578692 A0A0A6YYC8 382 aaPredicted RBP15.09■□□□□ 0.01
CRLF3-203ENST00000578692 IDSB3KWA1 339 aa15.09■□□□□ 0.01
CRLF3-203ENST00000578692 I3L1I5 382 aaPredicted RBP15.09■□□□□ 0.01
CRLF3-203ENST00000578692 FFAR3O14843 346 aa15.09■□□□□ 0.01
CRLF3-203ENST00000578692 GPR42O15529 346 aa15.09■□□□□ 0.01
CRLF3-203ENST00000578692 SEMA7AO75326 666 aa15.09■□□□□ 0.01
CRLF3-203ENST00000578692 CBX6O95503 412 aa15.09■□□□□ 0.01
CRLF3-203ENST00000578692 NR6A1Q15406 480 aa15.09■□□□□ 0.01
CRLF3-203ENST00000578692 NDUFA9Q16795 377 aa15.09■□□□□ 0.01
CRLF3-203ENST00000578692 RBM20Q5T481 1227 aaKnown RBP15.09■□□□□ 0.01
CRLF3-203ENST00000578692 KIAA0408Q6ZU52 694 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms