RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 YIPF4Q9BSR8 244 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 H2AFJQ9BTM1 129 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 NDC1Q9BTX1 674 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 MENTQ9BUN1 341 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 NLNQ9BYT8 704 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 PCBD2Q9H0N5 130 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 ACTR5Q9H9F9 607 aaPredicted RBP6.78□□□□□ -1.32
CASC3-205ENST00000577605 POPDC3Q9HBV1 291 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 PPANQ9NQ55 473 aaKnown RBP6.78□□□□□ -1.32
CASC3-205ENST00000577605 FBXO6Q9NRD1 293 aaPredicted RBP6.78□□□□□ -1.32
CASC3-205ENST00000577605 TRMT6Q9UJA5 497 aaKnown RBP6.78□□□□□ -1.32
CASC3-205ENST00000577605 ZNF180Q9UJW8 692 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 FBXO9Q9UK97 447 aaPredicted RBP6.78□□□□□ -1.32
CASC3-205ENST00000577605 SNX7Q9UNH6 387 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 FARSAQ9Y285 508 aaKnown RBP6.78□□□□□ -1.32
CASC3-205ENST00000577605 PADI2Q9Y2J8 665 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 VWA7Q9Y334 891 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 ARID1BQ8NFD5 2236 aaPredicted RBP6.78□□□□□ -1.32
CASC3-205ENST00000577605 SCN8AQ9UQD0 1980 aa6.78□□□□□ -1.32
CASC3-205ENST00000577605 C9J4A7 227 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 PRICKLE3O43900 615 aaPredicted RBP6.77□□□□□ -1.33
CASC3-205ENST00000577605 CREG1O75629 220 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 ONECUT2O95948 504 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 AHSGP02765 367 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 ENO2P09104 434 aaPredicted RBP6.77□□□□□ -1.33
CASC3-205ENST00000577605 ERVK-10P10266 1014 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 ACPPP15309 386 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 POU3F2P20265 443 aaPredicted RBP6.77□□□□□ -1.33
CASC3-205ENST00000577605 RPA3P35244 121 aaPredicted RBP6.77□□□□□ -1.33
CASC3-205ENST00000577605 RORAP35398 523 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 CARSP49589 748 aaKnown RBP6.77□□□□□ -1.33
CASC3-205ENST00000577605 AP1S2P56377 157 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 DCDP81605 110 aaKnown RBP6.77□□□□□ -1.33
CASC3-205ENST00000577605 PRDX1Q06830 199 aaKnown RBP6.77□□□□□ -1.33
CASC3-205ENST00000577605 CDC20Q12834 499 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 HYAL2Q12891 473 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 PDIA2Q13087 525 aaKnown RBP6.77□□□□□ -1.33
CASC3-205ENST00000577605 DNASE1L3Q13609 305 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 KCNAB1Q14722 419 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 GRM7Q14831 915 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 UGT8Q16880 541 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 GLE1Q53GS7 698 aaKnown RBP6.77□□□□□ -1.33
CASC3-205ENST00000577605 ACSBG2Q5FVE4 666 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 TEDDM1Q5T9Z0 273 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 DUPD1Q68J44 220 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 ZNF549Q6P9A3 640 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 CNSTQ6PJW8 725 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 FIGLAQ6QHK4 219 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 NAPRTQ6XQN6 538 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 CYHR1Q6ZMK1 362 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 CDHR3Q6ZTQ4 885 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 LHFPL2Q6ZUX7 228 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 VASH2Q86V25 355 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 MCATQ8IVS2 390 aaKnown RBP6.77□□□□□ -1.33
CASC3-205ENST00000577605 DSELQ8IZU8 1212 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 AGGF1Q8N302 714 aaeCLIP6.77□□□□□ -1.335e-8■■□□□ 11.5
CASC3-205ENST00000577605 NKAPQ8N5F7 415 aaKnown RBP6.77□□□□□ -1.33
CASC3-205ENST00000577605 TMEM102Q8N9M5 508 aaPredicted RBP6.77□□□□□ -1.33
CASC3-205ENST00000577605 TTC29Q8NA56 475 aaPredicted RBP6.77□□□□□ -1.33
CASC3-205ENST00000577605 LINC01555Q8NAE3 123 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 FBXO36Q8NEA4 188 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 FLVCR1-AS1Q8TAF5 88 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 CD200R1Q8TD46 325 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 ATL1Q8WXF7 558 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 STARD8Q92502 1023 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 TRIM44Q96DX7 344 aaPredicted RBP6.77□□□□□ -1.33
CASC3-205ENST00000577605 ELMO2Q96JJ3 720 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 PARVBQ9HBI1 364 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 TXLNGQ9NUQ3 528 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 SPHK1Q9NYA1 384 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 EURLQ9NYK6 297 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 MOCS1Q9NZB8 636 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 TXNDC16Q9P2K2 825 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 CDC23Q9UJX2 597 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 CROTQ9UKG9 612 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 POLHQ9Y253 713 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 SNX24Q9Y343 169 aa6.77□□□□□ -1.33
CASC3-205ENST00000577605 CNOT1A5YKK6 2376 aaKnown RBP6.77□□□□□ -1.33
CASC3-205ENST00000577605 FITM1A5D6W6 292 aa6.76□□□□□ -1.33
CASC3-205ENST00000577605 ARHGEF33A8MVX0 844 aa6.76□□□□□ -1.33
CASC3-205ENST00000577605 PCDH17O14917 1159 aa6.76□□□□□ -1.33
CASC3-205ENST00000577605 ZSCAN9O15535 394 aaPredicted RBP6.76□□□□□ -1.33
CASC3-205ENST00000577605 PRPF4O43172 522 aaKnown RBP eCLIP6.76□□□□□ -1.33
CASC3-205ENST00000577605 ZNF749O43361 778 aa6.76□□□□□ -1.33
CASC3-205ENST00000577605 RGS9O75916 674 aaPredicted RBP6.76□□□□□ -1.33
CASC3-205ENST00000577605 NTRK1P04629 796 aa6.76□□□□□ -1.33
CASC3-205ENST00000577605 ZNF28P17035 718 aa6.76□□□□□ -1.33
CASC3-205ENST00000577605 ITGAXP20702 1163 aa6.76□□□□□ -1.33
CASC3-205ENST00000577605 MAGP20916 626 aa6.76□□□□□ -1.33
CASC3-205ENST00000577605 SOX18P35713 384 aa6.76□□□□□ -1.33
CASC3-205ENST00000577605 GRIA3P42263 894 aa6.76□□□□□ -1.33
CASC3-205ENST00000577605 RPL21P46778 160 aaKnown RBP6.76□□□□□ -1.33
CASC3-205ENST00000577605 GABRA4P48169 554 aa6.76□□□□□ -1.33
CASC3-205ENST00000577605 PNLIPRP1P54315 467 aa6.76□□□□□ -1.33
CASC3-205ENST00000577605 SLC12A2P55011 1212 aa6.76□□□□□ -1.33
CASC3-205ENST00000577605 NAB1Q13506 487 aa6.76□□□□□ -1.33
CASC3-205ENST00000577605 TBR1Q16650 682 aa6.76□□□□□ -1.33
CASC3-205ENST00000577605 GRAMD1BQ3KR37 738 aa6.76□□□□□ -1.33
CASC3-205ENST00000577605 ZNF789Q5FWF6 425 aa6.76□□□□□ -1.33
CASC3-205ENST00000577605 FAM209AQ5JX71 171 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms