RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 SNRNP27Q8WVK2 155 aaKnown RBP2.71□□□□□ -1.98
CDC27-218ENST00000575830 ARHGAP45Q92619 1136 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 EXT2Q93063 718 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 SPSB1Q96BD6 273 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 CENPTQ96BT3 561 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 THOC1Q96FV9 657 aaKnown RBP2.71□□□□□ -1.98
CDC27-218ENST00000575830 OTUB1Q96FW1 271 aaPredicted RBP2.71□□□□□ -1.98
CDC27-218ENST00000575830 CDCA3Q99618 268 aaPredicted RBP2.71□□□□□ -1.98
CDC27-218ENST00000575830 TRIM51Q9BSJ1 452 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 PANK2Q9BZ23 570 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 FAM49AQ9H0Q0 323 aaPredicted RBP2.71□□□□□ -1.98
CDC27-218ENST00000575830 FZD8Q9H461 694 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 MED20Q9H944 212 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 PPANQ9NQ55 473 aaKnown RBP2.71□□□□□ -1.98
CDC27-218ENST00000575830 CLIC5Q9NZA1 410 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 PRDM4Q9UKN5 801 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 ELF5Q9UKW6 265 aaPredicted RBP2.71□□□□□ -1.98
CDC27-218ENST00000575830 WIPI2Q9Y4P8 454 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 LIPGQ9Y5X9 500 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 KDM6BO15054 1643 aa2.71□□□□□ -1.98
CDC27-218ENST00000575830 SMARCA2P51531 1590 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 LOC105371242A0A075B767 164 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 URADA6NGE7 173 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 SNURFLB1AK76 121 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 SNX3O60493 162 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 RECQL5O94762 991 aaPredicted RBP2.7□□□□□ -1.98
CDC27-218ENST00000575830 ACSL3O95573 720 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 ATP1B1P05026 303 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 LHCGRP22888 699 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 SP100P23497 879 aaPredicted RBP2.7□□□□□ -1.98
CDC27-218ENST00000575830 TLX1P31314 330 aaPredicted RBP2.7□□□□□ -1.98
CDC27-218ENST00000575830 SOX3P41225 446 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 GMPSP49915 693 aaPredicted RBP2.7□□□□□ -1.98
CDC27-218ENST00000575830 RAD23AP54725 363 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 TMEM50BP56557 158 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 OR1D5P58170 312 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 IRX4P78413 519 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 MYL7Q01449 175 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 ELAVL2Q12926 359 aaKnown RBP2.7□□□□□ -1.98
CDC27-218ENST00000575830 NECTIN1Q15223 517 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 PTPN14Q15678 1187 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 TMEM266Q2M3C6 531 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 HYAL4Q2M3T9 481 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 FAM174BQ3ZCQ3 159 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 BSPRYQ5W0U4 402 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 KRT80Q6KB66 452 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 ZNF343Q6P1L6 599 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 STXBP4Q6ZWJ1 553 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 CPEB2Q7Z5Q1 589 aaKnown RBP2.7□□□□□ -1.98
CDC27-218ENST00000575830 TLK2Q86UE8 772 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 RCOR2Q8IZ40 523 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 NOA1Q8NC60 698 aaKnown RBP2.7□□□□□ -1.98
CDC27-218ENST00000575830 SLC37A3Q8NCC5 494 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 GPRC5AQ8NFJ5 357 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 ZNF519Q8TB69 540 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 PROX1Q92786 737 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 ANKRD9Q96BM1 317 aaPredicted RBP2.7□□□□□ -1.98
CDC27-218ENST00000575830 ZNF486Q96H40 463 aaPredicted RBP2.7□□□□□ -1.98
CDC27-218ENST00000575830 PRICKLE1Q96MT3 831 aaPredicted RBP2.7□□□□□ -1.98
CDC27-218ENST00000575830 SPATA33Q96N06 139 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 NECTIN4Q96NY8 510 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 AGAP3Q96P47 875 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 TDRD1Q9BXT4 1180 aaKnown RBP2.7□□□□□ -1.98
CDC27-218ENST00000575830 ANKRD2Q9GZV1 360 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 HOXD1Q9GZZ0 328 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 TBC1D7Q9P0N9 293 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 BCCIPQ9P287 314 aaKnown RBP eCLIP2.7□□□□□ -1.98
CDC27-218ENST00000575830 C19orf25Q9UFG5 118 aaPredicted RBP2.7□□□□□ -1.98
CDC27-218ENST00000575830 CHKBQ9Y259 395 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 CSAG2Q9Y5P2 127 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 R4GN57 208 aa2.7□□□□□ -1.98
CDC27-218ENST00000575830 TP53BP1Q12888 1972 aaPredicted RBP2.7□□□□□ -1.98
CDC27-218ENST00000575830 WDR62O43379 1518 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 A0A087WV48 116 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 ERI2A8K979 691 aaKnown RBP2.69□□□□□ -1.98
CDC27-218ENST00000575830 NPIPB9F8W1W9 429 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 CCL24O00175 119 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 RNF103O00237 685 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 FPGTO14772 594 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 PI15O43692 258 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 GSRP00390 522 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 DNTTP04053 509 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 TRIM49P0CI25 452 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 TRIM49CP0CI26 452 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 GATA2P23769 480 aaPredicted RBP2.69□□□□□ -1.98
CDC27-218ENST00000575830 PSMA3P25788 255 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 SHC1P29353 583 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 EEF1DP29692 281 aaKnown RBP2.69□□□□□ -1.98
CDC27-218ENST00000575830 CDC25CP30307 473 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 MMP12P39900 470 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 PRELPP51888 382 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 XGP55808 180 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 DSCR10P59022 87 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 KRTAP10-3P60369 221 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 CALD1Q05682 793 aaKnown RBP2.69□□□□□ -1.98
CDC27-218ENST00000575830 TRIM29Q14134 588 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 ZNF273Q14593 569 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 FASTKD3Q14CZ7 662 aaKnown RBP2.69□□□□□ -1.98
CDC27-218ENST00000575830 RASA2Q15283 850 aa2.69□□□□□ -1.98
CDC27-218ENST00000575830 TOMM20Q15388 145 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms