RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 U3KQA8 63 aa23.13■■□□□ 1.29
ATPAF1-213ENST00000574428 GOLGA8QA0A0J9YX86 632 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 GOLGA8OA6NCC3 632 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 TRPC5OSA6NMA1 111 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 GOLGA8NF8WBI6 632 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 NRP2O60462 931 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 EPHA3P29320 983 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 CAPZBP47756 277 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 OR1D5P58170 312 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 ADNP2Q6IQ32 1131 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 EFL1Q7Z2Z2 1120 aaKnown RBP23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 FAM129CQ86XR2 697 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 FAM181AQ8N9Y4 354 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 C3orf30Q96M34 536 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 PPM1MQ96MI6 270 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 DPH7Q9BTV6 452 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 ELOVL6Q9H5J4 265 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 MEAF6Q9HAF1 191 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 DNAAF2Q9NVR5 837 aaKnown RBP23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 RALGAPA1Q6GYQ0 2036 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 ANKRD65E5RJM6 399 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 SDHDO14521 159 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 KIAA0754O94854 1291 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 KRT6AP02538 564 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 KRT6BP04259 564 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 ZNF883P0CG24 379 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 KRT6CP48668 564 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 NEK2P51955 445 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 PAGE2BQ5JRK9 111 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 NKAIN2Q5VXU1 208 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 GUSBP11Q6P575 273 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 KLHL35Q6PF15 583 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 SPESP1Q6UW49 350 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 Q8N9G6 341 aaPredicted RBP23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 CCDC74AQ96AQ1 378 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 RXFP3Q9NSD7 469 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 ZNF490Q9ULM2 529 aaPredicted RBP23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 SNX6Q9UNH7 406 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 ARL2BPQ9Y2Y0 163 aa23.12■■□□□ 1.29
ATPAF1-213ENST00000574428 ATP6AP2A0A1C7CYW4 349 aa23.11■■□□□ 1.29
ATPAF1-213ENST00000574428 ULK1O75385 1050 aa23.11■■□□□ 1.29
ATPAF1-213ENST00000574428 ATP6AP2O75787 350 aa23.11■■□□□ 1.29
ATPAF1-213ENST00000574428 EPHA4P54764 986 aa23.11■■□□□ 1.29
ATPAF1-213ENST00000574428 INHBCP55103 352 aa23.11■■□□□ 1.29
ATPAF1-213ENST00000574428 CSNK1G2P78368 415 aa23.11■■□□□ 1.29
ATPAF1-213ENST00000574428 FRG2Q64ET8 278 aa23.11■■□□□ 1.29
ATPAF1-213ENST00000574428 MED27Q6P2C8 311 aa23.11■■□□□ 1.29
ATPAF1-213ENST00000574428 OR4K1Q8NGD4 311 aa23.11■■□□□ 1.29
ATPAF1-213ENST00000574428 FRG2BQ96QU4 278 aa23.11■■□□□ 1.29
ATPAF1-213ENST00000574428 OR52B2Q96RD2 323 aa23.11■■□□□ 1.29
ATPAF1-213ENST00000574428 SEMA4GQ9NTN9 838 aa23.11■■□□□ 1.29
ATPAF1-213ENST00000574428 EVA1BQ9NVM1 165 aa23.11■■□□□ 1.29
ATPAF1-213ENST00000574428 NCDNQ9UBB6 729 aa23.11■■□□□ 1.29
ATPAF1-213ENST00000574428 CPED1A4D0V7 1026 aa23.1■■□□□ 1.29
ATPAF1-213ENST00000574428 H0YIV9 168 aa23.1■■□□□ 1.29
ATPAF1-213ENST00000574428 PDYNP01213 254 aa23.1■■□□□ 1.29
ATPAF1-213ENST00000574428 PCNAP12004 261 aa23.1■■□□□ 1.29
ATPAF1-213ENST00000574428 LSSP48449 732 aa23.1■■□□□ 1.29
ATPAF1-213ENST00000574428 REEP5Q00765 189 aa23.1■■□□□ 1.29
ATPAF1-213ENST00000574428 PRR23CQ6ZRP0 262 aa23.1■■□□□ 1.29
ATPAF1-213ENST00000574428 RNF175Q8N4F7 328 aa23.1■■□□□ 1.29
ATPAF1-213ENST00000574428 OR7G3Q8NG95 312 aa23.1■■□□□ 1.29
ATPAF1-213ENST00000574428 SELENOMQ8WWX9 145 aa23.1■■□□□ 1.29
ATPAF1-213ENST00000574428 CCT6BQ92526 530 aa23.1■■□□□ 1.29
ATPAF1-213ENST00000574428 USP7Q93009 1102 aa23.1■■□□□ 1.29
ATPAF1-213ENST00000574428 RILPQ96NA2 401 aa23.1■■□□□ 1.29
ATPAF1-213ENST00000574428 AIF1LQ9BQI0 150 aa23.1■■□□□ 1.29
ATPAF1-213ENST00000574428 KLHL25Q9H0H3 589 aa23.1■■□□□ 1.29
ATPAF1-213ENST00000574428 POMT2Q9UKY4 750 aa23.1■■□□□ 1.29
ATPAF1-213ENST00000574428 SNRNP200O75643 2136 aaKnown RBP23.1■■□□□ 1.29
ATPAF1-213ENST00000574428 IGHV1OR21-1A0A087WYE8 117 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 FEZF1A0PJY2 475 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 LMNAP02545 664 aaKnown RBP23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 MAGP20916 626 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 NBL1P41271 181 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 GRIA3P42263 894 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 GPR3P46089 330 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 LAPTM5Q13571 262 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 DDX39BQ13838 428 aaKnown RBP23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 NR1D2Q14995 579 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 SUZ12Q15022 739 aaKnown RBP23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 HIST2H2ACQ16777 129 aaPredicted RBP23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 SLC5A12Q1EHB4 618 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 HIST2H2AA3Q6FI13 130 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 IRGCQ6NXR0 463 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 PLD3Q8IV08 490 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 CHCHD4Q8N4Q1 142 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 WDR20Q8TBZ3 569 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 ABCG4Q9H172 646 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 IRF2BPLQ9H1B7 796 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 PRDM4Q9UKN5 801 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 PCDHGA11Q9Y5H2 935 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 GOLGA4Q13439 2230 aaKnown RBP23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 CCT8L1PA6NM43 557 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 CDX4O14627 284 aaPredicted RBP23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 PVRP15151 417 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 AMZ1Q400G9 498 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 TMIGD1Q6UXZ0 262 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 CCDC121Q6ZUS5 278 aa23.09■■□□□ 1.29
ATPAF1-213ENST00000574428 KRT78Q8N1N4 520 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms