RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 CD40LGP29965 261 aa15.16■□□□□ 0.02
NUP88-207ENST00000573584 LIPAP38571 399 aa15.16■□□□□ 0.02
NUP88-207ENST00000573584 GSSP48637 474 aa15.16■□□□□ 0.02
NUP88-207ENST00000573584 HNRNPFP52597 415 aaKnown RBP15.16■□□□□ 0.02
NUP88-207ENST00000573584 ITGA1P56199 1179 aa15.16■□□□□ 0.02
NUP88-207ENST00000573584 SRSF11Q05519 484 aaKnown RBP15.16■□□□□ 0.02
NUP88-207ENST00000573584 UGT8Q16880 541 aa15.16■□□□□ 0.02
NUP88-207ENST00000573584 UBE2UQ5VVX9 321 aa15.16■□□□□ 0.02
NUP88-207ENST00000573584 RETSATQ6NUM9 610 aa15.16■□□□□ 0.02
NUP88-207ENST00000573584 TPGS1Q6ZTW0 290 aa15.16■□□□□ 0.02
NUP88-207ENST00000573584 APCDD1Q8J025 514 aa15.16■□□□□ 0.02
NUP88-207ENST00000573584 L3MBTL4Q8NA19 623 aa15.16■□□□□ 0.02
NUP88-207ENST00000573584 ALG14Q96F25 216 aa15.16■□□□□ 0.02
NUP88-207ENST00000573584 SIGLEC11Q96RL6 698 aa15.16■□□□□ 0.02
NUP88-207ENST00000573584 PITX2Q99697 317 aa15.16■□□□□ 0.02
NUP88-207ENST00000573584 SLC12A9Q9BXP2 914 aa15.16■□□□□ 0.02
NUP88-207ENST00000573584 ABCB10Q9NRK6 738 aa15.16■□□□□ 0.02
NUP88-207ENST00000573584 ANKMY1Q9P2S6 941 aa15.16■□□□□ 0.02
NUP88-207ENST00000573584 NUP214P35658 2090 aaPredicted RBP15.15■□□□□ 0.02
NUP88-207ENST00000573584 AIREO43918 545 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 C9P02748 559 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 COX7A2P14406 83 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 PCSK2P16519 638 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 ITPKAP23677 461 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 AOAHP28039 575 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 CST5P28325 142 aaPredicted RBP15.15■□□□□ 0.02
NUP88-207ENST00000573584 SMAD3P84022 425 aaKnown RBP15.15■□□□□ 0.02
NUP88-207ENST00000573584 SLC13A2Q13183 592 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 CYP2U1Q7Z449 544 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 ARMC8Q8IUR7 673 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 CLECL1Q8IZS7 167 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 CBARPQ8N350 705 aaPredicted RBP15.15■□□□□ 0.02
NUP88-207ENST00000573584 DCAF4L2Q8NA75 395 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 CDC26Q8NHZ8 85 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 BCL7CQ8WUZ0 217 aaPredicted RBP15.15■□□□□ 0.02
NUP88-207ENST00000573584 COPS8Q99627 209 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 C19orf43Q9BQ61 176 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 COPS4Q9BT78 406 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 ANKHQ9HCJ1 492 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 PABPN1LA6NDY0 278 aaKnown RBP15.15■□□□□ 0.02
NUP88-207ENST00000573584 PRAMEF4O60810 478 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 SCN2BO60939 215 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 C21orf33P30042 268 aaPredicted RBP15.15■□□□□ 0.02
NUP88-207ENST00000573584 SERPINB1P30740 379 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 EIF2DP41214 584 aaKnown RBP15.15■□□□□ 0.02
NUP88-207ENST00000573584 ACLYP53396 1101 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 WNT3P56703 355 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 CSNK2BP67870 215 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 TUBA1BP68363 451 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 PLD1Q13393 1074 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 ZNF404Q494X3 552 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 PRAMEF9Q5VWM5 478 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 GPR153Q6NV75 609 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 TUBA1AQ71U36 451 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 TCAIMQ8N3R3 496 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 HJURPQ8NCD3 748 aaPredicted RBP15.15■□□□□ 0.02
NUP88-207ENST00000573584 HRASLS5Q96KN8 279 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 ZDHHC3Q9NYG2 299 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 SLCO3A1Q9UIG8 710 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 VPS4AQ9UN37 437 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 PCDHGA6Q9Y5G7 932 aa15.15■□□□□ 0.02
NUP88-207ENST00000573584 PIKFYVEQ9Y2I7 2098 aa15.14■□□□□ 0.01
NUP88-207ENST00000573584 KRT87PA6NCN2 255 aa15.14■□□□□ 0.01
NUP88-207ENST00000573584 NPIPB15A6NHN6 443 aaPredicted RBP15.14■□□□□ 0.01
NUP88-207ENST00000573584 VIPP01282 170 aa15.14■□□□□ 0.01
NUP88-207ENST00000573584 SLC8B1Q6J4K2 584 aa15.14■□□□□ 0.01
NUP88-207ENST00000573584 Q6ZPB1 254 aaPredicted RBP15.14■□□□□ 0.01
NUP88-207ENST00000573584 ZSWIM9Q86XI8 627 aa15.14■□□□□ 0.01
NUP88-207ENST00000573584 ASIC4Q96FT7 647 aa15.14■□□□□ 0.01
NUP88-207ENST00000573584 C2orf49Q9BVC5 232 aaPredicted RBP15.14■□□□□ 0.01
NUP88-207ENST00000573584 MMP27Q9H306 513 aa15.14■□□□□ 0.01
NUP88-207ENST00000573584 RUBCNLQ9H714 662 aa15.14■□□□□ 0.01
NUP88-207ENST00000573584 KIAA1522Q9P206 1035 aaPredicted RBP15.14■□□□□ 0.01
NUP88-207ENST00000573584 STOML2Q9UJZ1 356 aa15.14■□□□□ 0.01
NUP88-207ENST00000573584 AGAP14A8MT82 685 aa15.14■□□□□ 0.01
NUP88-207ENST00000573584 UPK1BO75841 260 aa15.14■□□□□ 0.01
NUP88-207ENST00000573584 PRKAR2AP13861 404 aaKnown RBP15.14■□□□□ 0.01
NUP88-207ENST00000573584 SLC6A12P48065 614 aa15.14■□□□□ 0.01
NUP88-207ENST00000573584 B4GALNT1Q00973 533 aa15.14■□□□□ 0.01
NUP88-207ENST00000573584 PRSS36Q5K4E3 855 aa15.14■□□□□ 0.01
NUP88-207ENST00000573584 ASB11Q8WXH4 323 aa15.14■□□□□ 0.01
NUP88-207ENST00000573584 FCGR1BQ92637 280 aa15.14■□□□□ 0.01
NUP88-207ENST00000573584 HTRA1Q92743 480 aa15.14■□□□□ 0.01
NUP88-207ENST00000573584 TPT1P8Q9HAU6 139 aa15.14■□□□□ 0.01
NUP88-207ENST00000573584 AMBNQ9NP70 447 aa15.14■□□□□ 0.01
NUP88-207ENST00000573584 LRFN2Q9ULH4 789 aa15.14■□□□□ 0.01
NUP88-207ENST00000573584 RNF6Q9Y252 685 aa15.14■□□□□ 0.01
NUP88-207ENST00000573584 HTTP42858 3142 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 NPIPB8E9PQR5 432 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 C8GP07360 202 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 NUDT7P0C024 238 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 ACPPP15309 386 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 HNMTP50135 292 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 ELP6Q0PNE2 266 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 CHIT1Q13231 466 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 VEZF1Q14119 521 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 ATP13A5Q4VNC0 1218 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 TMEM53Q6P2H8 277 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 LACC1Q8IV20 430 aa15.13■□□□□ 0.01
NUP88-207ENST00000573584 KIAA1958Q8N8K9 716 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms