RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 OR2Y1Q8NGV0 311 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 ANKRD49Q8WVL7 239 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 HIST1H2AHQ96KK5 128 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 RBBP8Q99708 897 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 HIST1H2AJQ99878 128 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 H2AFJQ9BTM1 129 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 PCBD2Q9H0N5 130 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 POPDC3Q9HBV1 291 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 ZNF71Q9NQZ8 489 aaPredicted RBP12.44□□□□□ -0.42
CNOT1-220ENST00000569916 ZDHHC18Q9NUE0 388 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 ARL15Q9NXU5 204 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 UTP6Q9NYH9 597 aaKnown RBP12.44□□□□□ -0.42
CNOT1-220ENST00000569916 TLK1Q9UKI8 766 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 RUVBL1Q9Y265 456 aaKnown RBP12.44□□□□□ -0.42
CNOT1-220ENST00000569916 TP53TG5Q9Y2B4 290 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 NPEPPSL1A6NEC2 478 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 MKRN2OSH3BPM6 223 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 H7BY64 318 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 K7EM74 188 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 P2RX6O15547 441 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 ALBP02768 609 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 UMODP07911 640 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 PIM1P11309 404 aaPredicted RBP12.43□□□□□ -0.42
CNOT1-220ENST00000569916 NR1D1P20393 614 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 CCND1P24385 295 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 HRH2P25021 359 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 OTX2P32243 289 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 MAGEA4P43358 317 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 OR1D4P47884 311 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 EMP3P54852 163 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 GUCY2DQ02846 1103 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 ILF2Q12905 390 aaKnown RBP12.43□□□□□ -0.42
CNOT1-220ENST00000569916 SSPNQ14714 243 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 MUM1Q2TAK8 710 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 HKDC1Q2TB90 917 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 LACTB2Q53H82 288 aaPredicted RBP12.43□□□□□ -0.42
CNOT1-220ENST00000569916 OVCH1Q7RTY7 1134 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 MRGPREQ86SM8 312 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 C17orf64Q86WR6 236 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 ARHGEF39Q8N4T4 335 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 MMGT1Q8N4V1 131 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 NKAPQ8N5F7 415 aaKnown RBP12.43□□□□□ -0.42
CNOT1-220ENST00000569916 CSNK1A1LQ8N752 337 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 NOA1Q8NC60 698 aaKnown RBP12.43□□□□□ -0.42
CNOT1-220ENST00000569916 OR56A3Q8NH54 315 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 ANKRD7Q92527 254 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 PYCR2Q96C36 320 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 FBXL8Q96CD0 374 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 CABS1Q96KC9 395 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 PRAP1Q96NZ9 151 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 SPSB2Q99619 263 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 GPR22Q99680 433 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 CPNE1Q99829 537 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 TRIM54Q9BYV2 358 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 ING2Q9H160 280 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 SLC26A1Q9H2B4 701 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 WDR54Q9H977 334 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 CAB39LQ9H9S4 337 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 LRRC4CQ9HCJ2 640 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 TMEM184CQ9NVA4 438 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 CTSFQ9UBX1 484 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 NOVA2Q9UNW9 492 aaKnown RBP12.43□□□□□ -0.42
CNOT1-220ENST00000569916 MTO1Q9Y2Z2 717 aaKnown RBP12.43□□□□□ -0.42
CNOT1-220ENST00000569916 HEMK1Q9Y5R4 338 aaPredicted RBP12.43□□□□□ -0.42
CNOT1-220ENST00000569916 MAU2Q9Y6X3 613 aa12.43□□□□□ -0.42
CNOT1-220ENST00000569916 GCN1Q92616 2671 aaKnown RBP12.42□□□□□ -0.42
CNOT1-220ENST00000569916 PABPN1LA6NDY0 278 aaKnown RBP12.42□□□□□ -0.42
CNOT1-220ENST00000569916 CDC7O00311 574 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 SUV39H1O43463 412 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 GUCA1CO95843 209 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 PDGFAP04085 211 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 GP5P40197 560 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 CSNK1G2P78368 415 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 POU4F1Q01851 419 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 NKG7Q16617 165 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 KBTBD12Q3ZCT8 623 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 CAPN13Q6MZZ7 669 aaPredicted RBP12.42□□□□□ -0.42
CNOT1-220ENST00000569916 TCTN3Q6NUS6 607 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 PRMT9Q6P2P2 845 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 PRICKLE2Q7Z3G6 844 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 VN1R4Q7Z5H5 301 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 PPP1R32Q7Z5V6 425 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 PTRH1Q86Y79 214 aaKnown RBP12.42□□□□□ -0.42
CNOT1-220ENST00000569916 CTAGE3PQ8IX95 158 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 RERGQ96A58 199 aaPredicted RBP12.42□□□□□ -0.42
CNOT1-220ENST00000569916 ALKBH8Q96BT7 664 aaKnown RBP12.42□□□□□ -0.42
CNOT1-220ENST00000569916 PTERQ96BW5 349 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 IP6K3Q96PC2 410 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 OR4K3Q96R72 315 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 GPAMQ9HCL2 828 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 ZNF304Q9HCX3 659 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 ACSS2Q9NR19 701 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 TXNDC16Q9P2K2 825 aa12.42□□□□□ -0.42
CNOT1-220ENST00000569916 FASNP49327 2511 aaKnown RBP12.41□□□□□ -0.42
CNOT1-220ENST00000569916 KIF2AO00139 706 aaPredicted RBP12.41□□□□□ -0.42
CNOT1-220ENST00000569916 PHGDHO43175 533 aaKnown RBP12.41□□□□□ -0.42
CNOT1-220ENST00000569916 SLC28A2O43868 658 aa12.41□□□□□ -0.42
CNOT1-220ENST00000569916 CEACAM4O75871 244 aa12.41□□□□□ -0.42
CNOT1-220ENST00000569916 TUBB4AP04350 444 aa12.41□□□□□ -0.42
CNOT1-220ENST00000569916 CDH1P12830 882 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms