RNA–Protein interactions for RNA: ENST00000569376.5

TNRC6A-217, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 5

Gene TNRC6A, Length 610 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-217ENST00000569376 PPP1CAP62136 330 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 TUBB4BP68371 445 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 NKX6-1P78426 367 aaPredicted RBP4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 HSD11B2P80365 405 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 ACY1Q03154 408 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 AP1B1Q10567 949 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 WASHC5Q12768 1159 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 MSLNQ13421 630 aaPredicted RBP4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 TUBB2AQ13885 445 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 KEAP1Q14145 624 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 PRKD1Q15139 912 aaPredicted RBP4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 LDLRAP1Q5SW96 308 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 PLEKHS1Q5SXH7 462 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 IZUMO3Q5VZ72 239 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 ALS2CLQ60I27 953 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 ICE2Q659A1 982 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 IRGCQ6NXR0 463 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 RPUSD3Q6P087 351 aaKnown RBP4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 FAM199XQ6PEV8 388 aaPredicted RBP4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 TMEM220Q6QAJ8 160 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 CRTC3Q6UUV7 619 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 RANBP10Q6VN20 620 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 CERS6Q6ZMG9 384 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 FAM83HQ6ZRV2 1179 aaPredicted RBP4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 FAM92BQ6ZTR7 304 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 RAB43Q86YS6 212 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 TRIM48Q8IWZ4 208 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 CARFQ8N187 725 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 NKAPQ8N5F7 415 aaKnown RBP4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 SIDT2Q8NBJ9 832 aaKnown RBP4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 DDHD1Q8NEL9 900 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 PPHLN1Q8NEY8 458 aaKnown RBP4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 OR8K1Q8NGG5 319 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 ADAMTS18Q8TE60 1221 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 PPP4R1Q8TF05 950 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 RNF141Q8WVD5 230 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 CTNNBL1Q8WYA6 563 aaPredicted RBP4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 ZNF501Q96CX3 271 aaPredicted RBP4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 CXorf40BQ96DE9 158 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 RNF31Q96EP0 1072 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 ZNF514Q96K75 400 aaPredicted RBP4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 CNDP1Q96KN2 507 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 LINC00615Q96LM1 132 aaPredicted RBP4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 ZNF830Q96NB3 372 aaPredicted RBP4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 TTC25Q96NG3 672 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 FCRL5Q96RD9 977 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 RUFY1Q96T51 708 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 C19orf43Q9BQ61 176 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 TUBB2BQ9BVA1 445 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 PLA2G12AQ9BZM1 189 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 LIME1Q9H400 295 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 SYTL2Q9HCH5 934 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 BPIFA1Q9NP55 256 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 KCND1Q9NSA2 647 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 GPATCH2Q9NW75 528 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 SMOXQ9NWM0 555 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 HACD3Q9P035 362 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 SEC14L3Q9UDX4 400 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 TRPS1Q9UHF7 1281 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 FAM153AQ9UHL3 310 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 DUSP13Q9UII6 198 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 TTLL3Q9Y4R7 772 aa4.87□□□□□ -1.63
TNRC6A-217ENST00000569376 AKAP6Q13023 2319 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 A0A0A6YYK5 440 aaPredicted RBP4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 C17orf113A0A1B0GUU1 675 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 LRRD1A4D1F6 860 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 OR5K3A6NET4 321 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 PDZK1P1A8MUH7 402 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 IDSB3KWA1 339 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 PEX12O00623 359 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 APOL1O14791 398 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 PMPCBO75439 489 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 ZBTB11O95625 1053 aaPredicted RBP4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 RAF1P04049 648 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 RAB40ALP0C0E4 278 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 ZGLP1P0C6A0 271 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 EBLN1P0CF75 366 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 MTHFD1P11586 935 aaKnown RBP4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 HOXA5P20719 270 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 TRHRP34981 398 aaPredicted RBP4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 RORAP35398 523 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 GJC1P36383 396 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 SLC1A1P43005 524 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 HADHBP55084 474 aaKnown RBP4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 LINC00310P59036 64 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 EGR3Q06889 387 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 GPS2Q13227 327 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 KLF1Q13351 362 aaPredicted RBP4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 TUBB3Q13509 450 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 NFE2L1Q14494 772 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 MESDQ14696 234 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 CDSNQ15517 529 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 SLC1A5Q15758 541 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 ZNF658BQ4V348 819 aaPredicted RBP4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 ZNF789Q5FWF6 425 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 SIRPB2Q5JXA9 342 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 GPRC6AQ5T6X5 926 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 LCN10Q6JVE6 187 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 MFSD7Q6UXD7 560 aa4.86□□□□□ -1.63
TNRC6A-217ENST00000569376 NPNTQ6UXI9 565 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms