RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 GSX2Q9BZM3 304 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 C19orf12Q9NSK7 152 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 HACL1Q9UJ83 578 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 RIMS3Q9UJD0 308 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 PCDH17O14917 1159 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 VILLO15195 856 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 TPT1P13693 172 aaKnown RBP6.94□□□□□ -1.3
CNOT1-216ENST00000569240 HSPA7P48741 367 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 CRISP3P54108 245 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 GALK2Q01415 458 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 PFKPQ01813 784 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 DOK7Q18PE1 504 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 STEAP4Q687X5 459 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 PRSS55Q6UWB4 352 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-216ENST00000569240 CES3Q6UWW8 571 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 OR2T35Q8NGX2 323 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 RBPMSQ93062 196 aaKnown RBP6.94□□□□□ -1.3
CNOT1-216ENST00000569240 RAD51AP1Q96B01 352 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 PWWP2AQ96N64 755 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 UROC1Q96N76 676 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 ORAI2Q96SN7 254 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 CHIAQ9BZP6 476 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 CCDC86Q9H6F5 360 aaKnown RBP6.94□□□□□ -1.3
CNOT1-216ENST00000569240 SLC27A6Q9Y2P4 619 aa6.94□□□□□ -1.3
CNOT1-216ENST00000569240 SLC22A5O76082 557 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 TMEM63AO94886 807 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 ADRB2P07550 413 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 NR2C1P13056 603 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 HSD17B2P37059 387 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 NR4A2P43354 598 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 CACNG1Q06432 222 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 ST3GAL4Q11206 333 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 TARDBPQ13148 414 aaKnown RBP eCLIP6.93□□□□□ -1.39e-7■■■■□ 21.6
CNOT1-216ENST00000569240 ATAD3CQ5T2N8 411 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 CAPN13Q6MZZ7 669 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-216ENST00000569240 SLC27A1Q6PCB7 646 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 BLOC1S3Q6QNY0 202 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 RALGPS2Q86X27 583 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-216ENST00000569240 OR6V1Q8N148 313 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 TOP6BLQ8N6T0 577 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 ZFAND1Q8TCF1 268 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 GTF2H4Q92759 462 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 C2orf49Q9BVC5 232 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-216ENST00000569240 PIGMQ9H3S5 423 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 ATP13A2Q9NQ11 1180 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 AGPAT4Q9NRZ5 378 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 AGLP35573 1532 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 DEPDC5O75140 1603 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 GJA1P17302 382 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 CAPN3P20807 821 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 ADRA1BP35368 520 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 MSX2P35548 267 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-216ENST00000569240 RPL7AP62424 266 aaKnown RBP6.93□□□□□ -1.3
CNOT1-216ENST00000569240 CNTN2Q02246 1040 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 MXD1Q05195 221 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 ZNF529Q6P280 563 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 XYLT1Q86Y38 959 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 FATE1Q969F0 183 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 MMP19Q99542 508 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 COLEC11Q9BWP8 271 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 LHPPQ9H008 270 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 TIGARQ9NQ88 270 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 SMCO4Q9NRQ5 59 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 RBFOX1Q9NWB1 397 aaKnown RBP6.93□□□□□ -1.3
CNOT1-216ENST00000569240 INTS6Q9UL03 887 aaKnown RBP6.93□□□□□ -1.3
CNOT1-216ENST00000569240 ZNF175Q9Y473 711 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 RGS13O14921 159 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 TLR5O60602 858 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 JRKO75564 520 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 F10P00742 488 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 CBSLP0DN79 551 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 HSD3B1P14060 373 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 HSD3B2P26439 372 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 CBSP35520 551 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 SCNN1GP51170 649 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 PRR5P85299 388 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 OGDHQ02218 1023 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 CHRNEQ04844 493 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 BCL2L1Q07817 233 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 HNRNPA0Q13151 305 aaKnown RBP6.93□□□□□ -1.3
CNOT1-216ENST00000569240 DUSP6Q16828 381 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 CXorf57Q6NSI4 855 aaKnown RBP6.93□□□□□ -1.3
CNOT1-216ENST00000569240 DPY19L2P1Q6NXN4 242 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 CIR1Q86X95 450 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-216ENST00000569240 SLC7A5P1Q8MH63 180 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 DNAJC22Q8N4W6 341 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 OR56B4Q8NH76 319 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 TAAR8Q969N4 342 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 ACDQ96AP0 544 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 C17orf62Q9BQA9 187 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 TBC1D17Q9HA65 648 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 LYARQ9NX58 379 aaKnown RBP6.93□□□□□ -1.3
CNOT1-216ENST00000569240 A0A0G2JMP0 313 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 TEX13CA0A0J9YWL9 993 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 STK25O00506 426 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 PLATP00750 562 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 ITGA3P26006 1051 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 OR3A2P47893 321 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 VAMP2P63027 116 aa6.93□□□□□ -1.3
CNOT1-216ENST00000569240 MC2RQ01718 297 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms