RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 PTCD3Q96EY7 689 aaKnown RBP11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 CADM1Q9BY67 442 aaKnown RBP11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 MEAF6Q9HAF1 191 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 KCNK13Q9HB14 408 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 TANC1Q9C0D5 1861 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 MYOCOSA0A1B0GUC4 107 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 NDUFB5O43674 189 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 ATP6V1G2O95670 118 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 PDYNP01213 254 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 C1GALT1C1LP0DN25 315 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 ASMTP46597 345 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 UFM1P61960 85 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 DPTQ07507 201 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 SPIDRQ14159 915 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 KIAA0895LQ68EN5 471 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 GKN2Q86XP6 184 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 TMEFF1Q8IYR6 380 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 PDPRQ8NCN5 879 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 NSMCE2Q96MF7 247 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 MVB12BQ9H7P6 319 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 EXOSC4Q9NPD3 245 aaKnown RBP11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 MAP10Q9P2G4 905 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 A0A0J9YVX5 310 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 IFNA16P05015 189 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 AOC1P19801 751 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 TLX1P31314 330 aaPredicted RBP11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 LTBRP36941 435 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 RPL3P39023 403 aaKnown RBP11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 PPP2CBP62714 309 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 PPP2CAP67775 309 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 CTBSQ01459 385 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 PPP1R8Q12972 351 aaKnown RBP11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 CBLBQ13191 982 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 NFATC4Q14934 902 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 ZIK1Q3SY52 487 aaPredicted RBP11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 LIPJQ5W064 366 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 TRIM40Q6P9F5 258 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 TBC1D21Q8IYX1 336 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 FAM160A2Q8N612 972 aaPredicted RBP11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 BHLHE22Q8NFJ8 381 aaPredicted RBP11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 PIGKQ92643 395 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 ITCHQ96J02 903 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 LGR4Q9BXB1 951 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 ZBTB26Q9HCK0 441 aa11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 PTBP2Q9UKA9 531 aaKnown RBP11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 DNMT3AQ9Y6K1 912 aaPredicted RBP11.75□□□□□ -0.53
TMEM170A-205ENST00000568559 C17orf113A0A1B0GUU1 675 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 POM121BA6NF01 834 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 GPR89AB7ZAQ6 455 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 E7EQ34 232 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 PCDH7O60245 1069 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 SLC35G6P0C7Q6 338 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 GPR89BP0CG08 455 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 IFNA8P32881 189 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 GRIA3P42263 894 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 ELOCQ15369 112 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 POMZP3Q6PJE2 187 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 KIAA0907Q7Z7F0 614 aaPredicted RBP11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 SLC9B2Q86UD5 537 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 FAM13CQ8NE31 585 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 ZNF483Q8TF39 744 aaPredicted RBP11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 NELL1Q92832 810 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 SH3GL3Q99963 347 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 C6orf106Q9H6K1 298 aaPredicted RBP11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 TSPAN11A1L157 253 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 SDC3O75056 442 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 C1orf105O95561 183 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 MTHFD2P13995 350 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 CD9P21926 228 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 SHMT2P34897 504 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 DGKQP52824 942 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 B4GALNT1Q00973 533 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 KANK2Q63ZY3 851 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 CAPRIN2Q6IMN6 1127 aaKnown RBP11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 SLC22A15Q8IZD6 547 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 LSMEM2Q8N112 164 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 SRFBP1Q8NEF9 429 aaKnown RBP11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 TRIM8Q9BZR9 551 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 ARMC7Q9H6L4 198 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 CTPS2Q9NRF8 586 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 CNOT6Q9ULM6 557 aaKnown RBP11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 DGKBQ9Y6T7 804 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 LINC00854A0A1B0GVQ3 168 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 A8MU76 341 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 TRIM38O00635 465 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 KCNJ13O60928 360 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 JUPP14923 745 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 COL9A1P20849 921 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 NTSP30990 170 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 CRATP43155 626 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 HK3P52790 923 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 SKP1P63208 163 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 CDKL4Q5MAI5 379 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 AMIGO2Q86SJ2 522 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 B4GALNT2Q8NHY0 566 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 HRASLS2Q9NWW9 162 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 GMEB2Q9UKD1 530 aa11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 PRPF19Q9UMS4 504 aaKnown RBP11.74□□□□□ -0.53
TMEM170A-205ENST00000568559 CENPFP49454 3210 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms