RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 TRIM51Q9BSJ1 452 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 ZNF304Q9HCX3 659 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 CCDC177Q9NQR7 707 aaPredicted RBP13.78□□□□□ -0.2
CMTM3-215ENST00000568477 ARGLU1Q9NWB6 273 aaPredicted RBP13.78□□□□□ -0.2
CMTM3-215ENST00000568477 CDC14AQ9UNH5 594 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 PLAAQ9Y263 795 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 MAU2Q9Y6X3 613 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 AGPSO00116 658 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 TTI1O43156 1089 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 MED26O95402 600 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 AHSGP02765 367 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 FBLP22087 321 aaKnown RBP13.77□□□□□ -0.21
CMTM3-215ENST00000568477 ITGA8P53708 1063 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 CDKN2DP55273 166 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 TIAL1Q01085 375 aaKnown RBP eCLIP13.77□□□□□ -0.21
CMTM3-215ENST00000568477 RELAQ04206 551 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 OCA2Q04671 838 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 SP140Q13342 867 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 MYBPC3Q14896 1274 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 GLE1Q53GS7 698 aaKnown RBP13.77□□□□□ -0.21
CMTM3-215ENST00000568477 HP1BP3Q5SSJ5 553 aaPredicted RBP13.77□□□□□ -0.21
CMTM3-215ENST00000568477 TEDDM1Q5T9Z0 273 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 PAQR3Q6TCH7 311 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 SHISA6Q6ZSJ9 500 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 GALNT7Q86SF2 657 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 LRRC56Q8IYG6 542 aaPredicted RBP13.77□□□□□ -0.21
CMTM3-215ENST00000568477 DTWD1Q8N5C7 304 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 EFCAB3Q8N7B9 438 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 EEF1AKMT1Q8WVE0 214 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 LINGO1Q96FE5 620 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 VPS50Q96JG6 964 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 C10orf90Q96M02 699 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 PWWP2AQ96N64 755 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 PARD6BQ9BYG5 372 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 TRIM31Q9BZY9 425 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 SOX17Q9H6I2 414 aaPredicted RBP13.77□□□□□ -0.21
CMTM3-215ENST00000568477 PLAC1Q9HBJ0 212 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 ATP13A2Q9NQ11 1180 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 SEMA3GQ9NS98 782 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 C5AR2Q9P296 337 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 STOX2Q9P2F5 926 aaPredicted RBP13.77□□□□□ -0.21
CMTM3-215ENST00000568477 SLC17A6Q9P2U8 582 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 FBXL4Q9UKA2 621 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 RAB21Q9UL25 225 aa13.77□□□□□ -0.21
CMTM3-215ENST00000568477 RUVBL1Q9Y265 456 aaKnown RBP13.77□□□□□ -0.21
CMTM3-215ENST00000568477 VSTM2BA6NLU5 285 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 TXNDC9O14530 226 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 SLC16A5O15375 505 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 PRPF4O43172 522 aaKnown RBP eCLIP13.76□□□□□ -0.21
CMTM3-215ENST00000568477 SEC31AO94979 1220 aaKnown RBP13.76□□□□□ -0.21
CMTM3-215ENST00000568477 HRH2P25021 359 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 CD97P48960 835 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 TBPL1P62380 186 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 AIMP2Q13155 320 aaKnown RBP13.76□□□□□ -0.21
CMTM3-215ENST00000568477 PDAP1Q13442 181 aaKnown RBP13.76□□□□□ -0.21
CMTM3-215ENST00000568477 RBBP7Q16576 425 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 GARNL3Q5VVW2 1013 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 PRAMEF13Q5VWM6 474 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 STEAP4Q687X5 459 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 TRMT10BQ6PF06 316 aaKnown RBP13.76□□□□□ -0.21
CMTM3-215ENST00000568477 GPATCH11Q8N954 259 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 MIEF2Q96C03 454 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 MVB12AQ96EY5 273 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 CCDC138Q96M89 665 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 OR2A5Q96R48 311 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 WDR83Q9BRX9 315 aaKnown RBP13.76□□□□□ -0.21
CMTM3-215ENST00000568477 CRB3Q9BUF7 120 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 MFRPQ9BY79 579 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 PCBD2Q9H0N5 130 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 ANKZF1Q9H8Y5 726 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 PARVBQ9HBI1 364 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 CUEDC1Q9NWM3 386 aaPredicted RBP13.76□□□□□ -0.21
CMTM3-215ENST00000568477 ZNF282Q9UDV7 671 aaPredicted RBP13.76□□□□□ -0.21
CMTM3-215ENST00000568477 ADAMTS6Q9UKP5 1117 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 CORO1CQ9ULV4 474 aaPredicted RBP13.76□□□□□ -0.21
CMTM3-215ENST00000568477 PDE10AQ9Y233 779 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 HS3ST3B1Q9Y662 390 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 TEX264Q9Y6I9 313 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 CNTRLQ7Z7A1 2325 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 DOPEY2Q9Y3R5 2298 aa13.76□□□□□ -0.21
CMTM3-215ENST00000568477 PABPN1LA6NDY0 278 aaKnown RBP13.75□□□□□ -0.21
CMTM3-215ENST00000568477 SOCS6O14544 535 aa13.75□□□□□ -0.21
CMTM3-215ENST00000568477 NDC80O14777 642 aa13.75□□□□□ -0.21
CMTM3-215ENST00000568477 HAT1O14929 419 aa13.75□□□□□ -0.21
CMTM3-215ENST00000568477 IPO13O94829 963 aaKnown RBP13.75□□□□□ -0.21
CMTM3-215ENST00000568477 SORBS2O94875 1100 aaKnown RBP13.75□□□□□ -0.21
CMTM3-215ENST00000568477 HIST1H2AGP0C0S8 130 aaPredicted RBP13.75□□□□□ -0.21
CMTM3-215ENST00000568477 HIST1H2ADP20671 130 aa13.75□□□□□ -0.21
CMTM3-215ENST00000568477 ITGA3P26006 1051 aa13.75□□□□□ -0.21
CMTM3-215ENST00000568477 SOX8P57073 446 aa13.75□□□□□ -0.21
CMTM3-215ENST00000568477 IL2P60568 153 aa13.75□□□□□ -0.21
CMTM3-215ENST00000568477 C2orf54Q08AI8 447 aa13.75□□□□□ -0.21
CMTM3-215ENST00000568477 DSG2Q14126 1118 aa13.75□□□□□ -0.21
CMTM3-215ENST00000568477 FRG1Q14331 258 aaKnown RBP13.75□□□□□ -0.21
CMTM3-215ENST00000568477 HKDC1Q2TB90 917 aa13.75□□□□□ -0.21
CMTM3-215ENST00000568477 HECTD2Q5U5R9 776 aa13.75□□□□□ -0.21
CMTM3-215ENST00000568477 SLC6A19Q695T7 634 aa13.75□□□□□ -0.21
CMTM3-215ENST00000568477 FAM45BPQ6NSW5 357 aa13.75□□□□□ -0.21
CMTM3-215ENST00000568477 JMJD6Q6NYC1 403 aaPredicted RBP13.75□□□□□ -0.21
CMTM3-215ENST00000568477 WDR93Q6P2C0 686 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms