RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 ANKMY1Q9P2S6 941 aa12.45□□□□□ -0.42
CNOT1-213ENST00000568158 TLK1Q9UKI8 766 aa12.45□□□□□ -0.42
CNOT1-213ENST00000568158 SLC22A14Q9Y267 594 aa12.45□□□□□ -0.42
CNOT1-213ENST00000568158 IKBKGQ9Y6K9 419 aa12.45□□□□□ -0.42
CNOT1-213ENST00000568158 AP1M2Q9Y6Q5 423 aa12.45□□□□□ -0.42
CNOT1-213ENST00000568158 PTPRQQ9UMZ3 2332 aa12.45□□□□□ -0.42
CNOT1-213ENST00000568158 LAMA5O15230 3695 aa12.45□□□□□ -0.42
CNOT1-213ENST00000568158 A0A087X1B8 175 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 A0A096LPK6 155 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 EXOC1LA0A1B0GW35 172 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 TRIM49D1C9J1S8 452 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 ZSCAN9O15535 394 aaPredicted RBP12.44□□□□□ -0.42
CNOT1-213ENST00000568158 MED26O95402 600 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 STATHP02808 62 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 ABHD2P08910 425 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 HBQ1P09105 142 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 CDH1P12830 882 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 CCND1P24385 295 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 TNFRSF8P28908 595 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 SERPINB9P50453 376 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 VSNL1P62760 191 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 MEF2AQ02078 507 aaPredicted RBP12.44□□□□□ -0.42
CNOT1-213ENST00000568158 DNASE1L3Q13609 305 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 NAA25Q14CX7 972 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 TCTE1Q5JU00 501 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 CATSPEREQ5SY80 951 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 ZNF385CQ66K41 422 aaPredicted RBP12.44□□□□□ -0.42
CNOT1-213ENST00000568158 RHBDD2Q6NTF9 364 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 ZNF517Q6ZMY9 492 aaPredicted RBP12.44□□□□□ -0.42
CNOT1-213ENST00000568158 TTLL10Q6ZVT0 673 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 CENPLQ8N0S6 344 aaPredicted RBP12.44□□□□□ -0.42
CNOT1-213ENST00000568158 PLD6Q8N2A8 252 aaKnown RBP12.44□□□□□ -0.42
CNOT1-213ENST00000568158 DTWD1Q8N5C7 304 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 EXT2Q93063 718 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 SLC45A3Q96JT2 553 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 LRFN5Q96NI6 719 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 OR2A5Q96R48 311 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 HAUS8Q9BT25 410 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 NDC1Q9BTX1 674 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 NMRAL1Q9HBL8 299 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 ZNF358Q9NW07 568 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 CD274Q9NZQ7 290 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 NDOR1Q9UHB4 597 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 RNF112Q9ULX5 631 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 FARSAQ9Y285 508 aaKnown RBP12.44□□□□□ -0.42
CNOT1-213ENST00000568158 PCDHGA4Q9Y5G9 962 aa12.44□□□□□ -0.42
CNOT1-213ENST00000568158 PKD1L2Q7Z442 2459 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 FER1L5A0AVI2 2057 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 FEZF1A0PJY2 475 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 CAPN1P07384 714 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 HRH2P25021 359 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 SLC26A3P40879 764 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 GCGRP47871 477 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 GLRBP48167 497 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 SERPINB8P50452 374 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 RPS18P62269 152 aaKnown RBP12.43□□□□□ -0.42
CNOT1-213ENST00000568158 GRM7Q14831 915 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 ERCC6LQ2NKX8 1250 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 FAM69BQ5VUD6 431 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 MLIPQ5VWP3 458 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 C16orf46Q6P387 395 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 ADGRD1Q6QNK2 874 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 ZSCAN1Q8NBB4 408 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 STAG3L4Q8TBR4 150 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 SNRNP27Q8WVK2 155 aaKnown RBP12.43□□□□□ -0.42
CNOT1-213ENST00000568158 UBLCP1Q8WVY7 318 aaPredicted RBP12.43□□□□□ -0.42
CNOT1-213ENST00000568158 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.43□□□□□ -0.42
CNOT1-213ENST00000568158 NEIL2Q969S2 332 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 TSNARE1Q96NA8 513 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 GPR78Q96P69 363 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 GBP5Q96PP8 586 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 ATOH8Q96SQ7 321 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 MACROD1Q9BQ69 325 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 DHRS4Q9BTZ2 278 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 EFHD1Q9BUP0 239 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 CUTCQ9NTM9 273 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 TXLNGQ9NUQ3 528 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 ZNF180Q9UJW8 692 aa12.43□□□□□ -0.42
CNOT1-213ENST00000568158 HYKKA2RU49 373 aa12.42□□□□□ -0.42
CNOT1-213ENST00000568158 FITM1A5D6W6 292 aa12.42□□□□□ -0.42
CNOT1-213ENST00000568158 UBXN8O00124 270 aa12.42□□□□□ -0.42
CNOT1-213ENST00000568158 KRT38O76015 456 aa12.42□□□□□ -0.42
CNOT1-213ENST00000568158 WDR47O94967 919 aa12.42□□□□□ -0.42
CNOT1-213ENST00000568158 KLHL2O95198 593 aa12.42□□□□□ -0.42
CNOT1-213ENST00000568158 SHBGP04278 402 aa12.42□□□□□ -0.42
CNOT1-213ENST00000568158 SNRPAP09012 282 aaKnown RBP12.42□□□□□ -0.42
CNOT1-213ENST00000568158 FURINP09958 794 aa12.42□□□□□ -0.42
CNOT1-213ENST00000568158 PRKAR1AP10644 381 aa12.42□□□□□ -0.42
CNOT1-213ENST00000568158 AGXTP21549 392 aa12.42□□□□□ -0.42
CNOT1-213ENST00000568158 MAGEA12P43365 314 aa12.42□□□□□ -0.42
CNOT1-213ENST00000568158 SLC6A12P48065 614 aa12.42□□□□□ -0.42
CNOT1-213ENST00000568158 HSPA7P48741 367 aa12.42□□□□□ -0.42
CNOT1-213ENST00000568158 HNMTP50135 292 aa12.42□□□□□ -0.42
CNOT1-213ENST00000568158 ARSFP54793 590 aa12.42□□□□□ -0.42
CNOT1-213ENST00000568158 RPS15P62841 145 aaKnown RBP12.42□□□□□ -0.42
CNOT1-213ENST00000568158 DCDP81605 110 aaKnown RBP12.42□□□□□ -0.42
CNOT1-213ENST00000568158 NFKB2Q00653 900 aa12.42□□□□□ -0.42
CNOT1-213ENST00000568158 RELAQ04206 551 aa12.42□□□□□ -0.42
CNOT1-213ENST00000568158 ERV3-1Q14264 604 aa12.42□□□□□ -0.42
CNOT1-213ENST00000568158 NAA30Q147X3 362 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms