RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 MRPS2Q9Y399 296 aaKnown RBP17.72■□□□□ 0.43
LINC01238-205ENST00000567549 TRAV17A0A0B4J275 112 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 GOLGA6L10A0A0M3HER8 536 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 A1L4Q6 167 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 IDSB3KWA1 339 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 GOLGA8KD6RF30 607 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 GOLGA8TH3BQL2 631 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 SMAPO00193 183 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 BMP10O95393 424 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 SYF2O95926 243 aaKnown RBP17.71■□□□□ 0.43
LINC01238-205ENST00000567549 KRT14P02533 472 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 SERPINA7P05543 415 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 RGS4P49798 205 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 PTK6Q13882 451 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 FASTKQ14296 549 aaKnown RBP17.71■□□□□ 0.43
LINC01238-205ENST00000567549 LONRF1Q17RB8 773 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 ACSBG2Q5FVE4 666 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 ATG9BQ674R7 924 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 FBXO42Q6P3S6 717 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 SUSD1Q6UWL2 747 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 PAQR7Q86WK9 346 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 REXO1L1PQ8IX06 675 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 PRSS58Q8IYP2 241 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 SLC34A3Q8N130 599 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 INPP5DQ92835 1189 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 MAGOHBQ96A72 148 aaKnown RBP17.71■□□□□ 0.43
LINC01238-205ENST00000567549 FAM136AQ96C01 138 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 PBKQ96KB5 322 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 C10orf90Q96M02 699 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 C19orf25Q9UFG5 118 aaPredicted RBP17.71■□□□□ 0.43
LINC01238-205ENST00000567549 PCYOX1Q9UHG3 505 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 HEATR5BQ9P2D3 2071 aa17.71■□□□□ 0.43
LINC01238-205ENST00000567549 A0A1B0GUH1 482 aa17.7■□□□□ 0.42
LINC01238-205ENST00000567549 A0A1W2PQ72 361 aa17.7■□□□□ 0.42
LINC01238-205ENST00000567549 ZSCAN12O43309 604 aa17.7■□□□□ 0.42
LINC01238-205ENST00000567549 SLC16A8O95907 504 aa17.7■□□□□ 0.42
LINC01238-205ENST00000567549 CCND1P24385 295 aa17.7■□□□□ 0.42
LINC01238-205ENST00000567549 GRK3P35626 688 aa17.7■□□□□ 0.42
LINC01238-205ENST00000567549 VPS41P49754 854 aa17.7■□□□□ 0.42
LINC01238-205ENST00000567549 FOXL2P58012 376 aa17.7■□□□□ 0.42
LINC01238-205ENST00000567549 RPS15AP62244 130 aaKnown RBP17.7■□□□□ 0.42
LINC01238-205ENST00000567549 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.7■□□□□ 0.42
LINC01238-205ENST00000567549 LINC00696Q6ZRV3 163 aa17.7■□□□□ 0.42
LINC01238-205ENST00000567549 CENPUQ71F23 418 aa17.7■□□□□ 0.42
LINC01238-205ENST00000567549 KCNMB4Q86W47 210 aa17.7■□□□□ 0.42
LINC01238-205ENST00000567549 GRHL3Q8TE85 626 aa17.7■□□□□ 0.42
LINC01238-205ENST00000567549 ASB11Q8WXH4 323 aa17.7■□□□□ 0.42
LINC01238-205ENST00000567549 THAP11Q96EK4 314 aa17.7■□□□□ 0.42
LINC01238-205ENST00000567549 PKP4Q99569 1192 aa17.7■□□□□ 0.42
LINC01238-205ENST00000567549 ZBTB20Q9HC78 741 aaPredicted RBP17.7■□□□□ 0.42
LINC01238-205ENST00000567549 RRAGDQ9NQL2 400 aaPredicted RBP17.7■□□□□ 0.42
LINC01238-205ENST00000567549 OLAHQ9NV23 265 aa17.7■□□□□ 0.42
LINC01238-205ENST00000567549 RUVBL1Q9Y265 456 aaKnown RBP17.7■□□□□ 0.42
LINC01238-205ENST00000567549 MAD1L1Q9Y6D9 718 aa17.7■□□□□ 0.42
LINC01238-205ENST00000567549 DOPEY1Q5JWR5 2465 aa17.69■□□□□ 0.42
LINC01238-205ENST00000567549 MDC1Q14676 2089 aaKnown RBP17.69■□□□□ 0.42
LINC01238-205ENST00000567549 H0YIG0 161 aa17.69■□□□□ 0.42
LINC01238-205ENST00000567549 KIF5CO60282 957 aa17.69■□□□□ 0.42
LINC01238-205ENST00000567549 PRR35P0CG20 571 aa17.69■□□□□ 0.42
LINC01238-205ENST00000567549 SLC26A3P40879 764 aa17.69■□□□□ 0.42
LINC01238-205ENST00000567549 SKIV2L2P42285 1042 aaKnown RBP17.69■□□□□ 0.42
LINC01238-205ENST00000567549 CLCN7P51798 805 aa17.69■□□□□ 0.42
LINC01238-205ENST00000567549 SKP1P63208 163 aa17.69■□□□□ 0.42
LINC01238-205ENST00000567549 TRIP13Q15645 432 aaPredicted RBP17.69■□□□□ 0.42
LINC01238-205ENST00000567549 VWA2Q5GFL6 755 aa17.69■□□□□ 0.42
LINC01238-205ENST00000567549 ZNF425Q6IV72 752 aa17.69■□□□□ 0.42
LINC01238-205ENST00000567549 PRELID2Q8N945 189 aa17.69■□□□□ 0.42
LINC01238-205ENST00000567549 OR1N1Q8NGS0 311 aa17.69■□□□□ 0.42
LINC01238-205ENST00000567549 ZNF480Q8WV37 535 aa17.69■□□□□ 0.42
LINC01238-205ENST00000567549 OR2A5Q96R48 311 aa17.69■□□□□ 0.42
LINC01238-205ENST00000567549 TUBB6Q9BUF5 446 aa17.69■□□□□ 0.42
LINC01238-205ENST00000567549 RUBCNLQ9H714 662 aa17.69■□□□□ 0.42
LINC01238-205ENST00000567549 CCDC177Q9NQR7 707 aaPredicted RBP17.69■□□□□ 0.42
LINC01238-205ENST00000567549 C20orf96Q9NUD7 363 aaPredicted RBP17.69■□□□□ 0.42
LINC01238-205ENST00000567549 TMEM184CQ9NVA4 438 aa17.69■□□□□ 0.42
LINC01238-205ENST00000567549 DHRS7Q9Y394 339 aa17.69■□□□□ 0.42
LINC01238-205ENST00000567549 JRKLQ9Y4A0 524 aa17.69■□□□□ 0.42
LINC01238-205ENST00000567549 IGHV1-45A0A0A0MS14 117 aa17.68■□□□□ 0.42
LINC01238-205ENST00000567549 E7ENX8 843 aa17.68■□□□□ 0.42
LINC01238-205ENST00000567549 MASP2O00187 686 aa17.68■□□□□ 0.42
LINC01238-205ENST00000567549 ALOX12BO75342 701 aa17.68■□□□□ 0.42
LINC01238-205ENST00000567549 CRYABP02511 175 aaKnown RBP17.68■□□□□ 0.42
LINC01238-205ENST00000567549 COX6A1P12074 109 aa17.68■□□□□ 0.42
LINC01238-205ENST00000567549 CXCR5P32302 372 aa17.68■□□□□ 0.42
LINC01238-205ENST00000567549 TAP2Q03519 686 aa17.68■□□□□ 0.42
LINC01238-205ENST00000567549 ABHD17BQ5VST6 288 aa17.68■□□□□ 0.42
LINC01238-205ENST00000567549 NIPAL1Q6NVV3 410 aa17.68■□□□□ 0.42
LINC01238-205ENST00000567549 TBC1D19Q8N5T2 526 aa17.68■□□□□ 0.42
LINC01238-205ENST00000567549 CAMKVQ8NCB2 501 aa17.68■□□□□ 0.42
LINC01238-205ENST00000567549 HAS2Q92819 552 aa17.68■□□□□ 0.42
LINC01238-205ENST00000567549 MAGEB10Q96LZ2 347 aaPredicted RBP17.68■□□□□ 0.42
LINC01238-205ENST00000567549 TRIM56Q9BRZ2 755 aaKnown RBP17.68■□□□□ 0.42
LINC01238-205ENST00000567549 RNF32Q9H0A6 362 aa17.68■□□□□ 0.42
LINC01238-205ENST00000567549 TRMT6Q9UJA5 497 aaKnown RBP17.68■□□□□ 0.42
LINC01238-205ENST00000567549 SPENQ96T58 3664 aaKnown RBP17.68■□□□□ 0.42
LINC01238-205ENST00000567549 POLEQ07864 2286 aa17.68■□□□□ 0.42
LINC01238-205ENST00000567549 TCRBV7S3A2A0A539 114 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 GFYI3L273 518 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 AVILO75366 819 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 TTC4O95801 387 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 180 ms