RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 LRRC26Q2I0M4 334 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 VN1R5Q7Z5H4 357 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 OR2A14Q96R47 310 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 GDF15Q99988 308 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 TRMT13Q9NUP7 481 aaKnown RBP15.2■□□□□ 0.02
COMMD4-215ENST00000566843 FLRT1Q9NZU1 646 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 RAI2Q9Y5P3 530 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 TDRD15B5MCY1 1934 aaKnown RBP15.2■□□□□ 0.02
COMMD4-215ENST00000566843 SLC12A8A0AV02 714 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 NOTOA8MTQ0 251 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 M0QZ92 97 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 KDELR3O43731 214 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 ALX3O95076 343 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 KRT6AP02538 564 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 DNTTP04053 509 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 KRT6BP04259 564 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 HMBSP08397 361 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 TRAPPC2P0DI81 140 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 TRAPPC2BP0DI82 140 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 GABRB1P18505 474 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 SOX6P35712 828 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 KRT6CP48668 564 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 OLR1P78380 273 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 MTAPQ13126 283 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 MAP2K5Q13163 448 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 EIF4HQ15056 248 aaKnown RBP15.2■□□□□ 0.02
COMMD4-215ENST00000566843 BCL7AQ4VC05 210 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 MIB1Q86YT6 1006 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 CYP4Z2PQ8N1L4 340 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 FLCNQ8NFG4 579 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 NELL1Q92832 810 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 TMCO6Q96DC7 493 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 KCNC2Q96PR1 638 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 EGFL8Q99944 293 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 TTPALQ9BTX7 342 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 PCDHGB2Q9Y5G2 931 aa15.2■□□□□ 0.02
COMMD4-215ENST00000566843 NPIPB8E9PQR5 432 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 CLIC1O00299 241 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 PLK4O00444 970 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 MFN2O95140 757 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 PTHP01270 115 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 C1QCP02747 245 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 STSP08842 583 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 NAT1P18440 290 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 TACR1P25103 407 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 TIE1P35590 1138 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 IRF5Q13568 498 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 DUOXA1Q1HG43 343 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 ZFP69Q49AA0 526 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 NXNL2Q5VZ03 156 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 GPR153Q6NV75 609 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 Q6ZPB1 254 aaPredicted RBP15.19■□□□□ 0.02
COMMD4-215ENST00000566843 FAM124AQ86V42 546 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 EFHBQ8N7U6 833 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 RASSF5Q8WWW0 418 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 ULK4Q96C45 1275 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 FUBP3Q96I24 572 aaKnown RBP eCLIP15.19■□□□□ 0.02
COMMD4-215ENST00000566843 EXOC2Q96KP1 924 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 SLC30A2Q9BRI3 323 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 CHCHD6Q9BRQ6 235 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 KATNAL1Q9BW62 490 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 RNF38Q9H0F5 515 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 RDH14Q9HBH5 336 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 CFL2Q9Y281 166 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 PCDHGB3Q9Y5G1 929 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 CENPXA8MT69 81 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 ARHGAP33O14559 1287 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 PDYNP01213 254 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 EPB42P16452 691 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 ENGP17813 658 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 SDC1P18827 310 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 DGKAP23743 735 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 VEZF1Q14119 521 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 C10orf62Q5T681 223 aaPredicted RBP15.19■□□□□ 0.02
COMMD4-215ENST00000566843 PTRHD1Q6GMV3 140 aaKnown RBP15.19■□□□□ 0.02
COMMD4-215ENST00000566843 TMC5Q6UXY8 1006 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 CERS6Q6ZMG9 384 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 ZNF367Q7RTV3 350 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 GALNT10Q86SR1 603 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 RAVER1Q8IY67 606 aaKnown RBP15.19■□□□□ 0.02
COMMD4-215ENST00000566843 LKAAEAR1Q8TD35 194 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 CMTM7Q96FZ5 175 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 TSSK3Q96PN8 268 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 ADGRE3Q9BY15 652 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 CIPCQ9C0C6 399 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 RETREG1Q9H6L5 497 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 DDX28Q9NUL7 540 aaKnown RBP15.19■□□□□ 0.02
COMMD4-215ENST00000566843 ZNF226Q9NYT6 803 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 IL17CQ9P0M4 197 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 BTBD3Q9Y2F9 522 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 FNDC3AQ9Y2H6 1198 aaKnown RBP15.19■□□□□ 0.02
COMMD4-215ENST00000566843 PCDHGC4Q9Y5F7 938 aa15.19■□□□□ 0.02
COMMD4-215ENST00000566843 F8W810 466 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 GPR39O43194 453 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 KIAA0513O60268 411 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 SLITRK5O94991 958 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 CLDN9O95484 217 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 CHRNB1P11230 501 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 ACPPP15309 386 aa15.18■□□□□ 0.02
COMMD4-215ENST00000566843 PRKCAP17252 672 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms