RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 WDR77Q9BQA1 342 aaPredicted RBP17.44■□□□□ 0.38
USB1-213ENST00000566292 AARSD1Q9BTE6 412 aaKnown RBP17.44■□□□□ 0.38
USB1-213ENST00000566292 LHPPQ9H008 270 aa17.44■□□□□ 0.38
USB1-213ENST00000566292 ABCF3Q9NUQ8 709 aa17.44■□□□□ 0.38
USB1-213ENST00000566292 CUEDC1Q9NWM3 386 aaPredicted RBP17.44■□□□□ 0.38
USB1-213ENST00000566292 C3orf18Q9UK00 162 aa17.44■□□□□ 0.38
USB1-213ENST00000566292 CCNDBP1O95273 360 aa17.43■□□□□ 0.38
USB1-213ENST00000566292 EZRP15311 586 aaKnown RBP17.43■□□□□ 0.38
USB1-213ENST00000566292 IMPA1P29218 277 aa17.43■□□□□ 0.38
USB1-213ENST00000566292 SKIV2L2P42285 1042 aaKnown RBP17.43■□□□□ 0.38
USB1-213ENST00000566292 GLRBP48167 497 aa17.43■□□□□ 0.38
USB1-213ENST00000566292 FNTAP49354 379 aa17.43■□□□□ 0.38
USB1-213ENST00000566292 TIAL1Q01085 375 aaKnown RBP eCLIP17.43■□□□□ 0.38
USB1-213ENST00000566292 AGAP7PQ5VUJ5 663 aa17.43■□□□□ 0.38
USB1-213ENST00000566292 ATG9BQ674R7 924 aa17.43■□□□□ 0.38
USB1-213ENST00000566292 HIST2H2BCQ6DN03 193 aa17.43■□□□□ 0.38
USB1-213ENST00000566292 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.43■□□□□ 0.38
USB1-213ENST00000566292 PRR7Q8TB68 274 aa17.43■□□□□ 0.38
USB1-213ENST00000566292 PPP4R1Q8TF05 950 aa17.43■□□□□ 0.38
USB1-213ENST00000566292 GRK7Q8WTQ7 553 aa17.43■□□□□ 0.38
USB1-213ENST00000566292 MVB12AQ96EY5 273 aa17.43■□□□□ 0.38
USB1-213ENST00000566292 THOC3Q96J01 351 aaKnown RBP17.43■□□□□ 0.38
USB1-213ENST00000566292 AGAP4Q96P64 663 aa17.43■□□□□ 0.38
USB1-213ENST00000566292 BARD1Q99728 777 aaKnown RBP17.43■□□□□ 0.38
USB1-213ENST00000566292 IARS2Q9NSE4 1012 aaKnown RBP17.43■□□□□ 0.38
USB1-213ENST00000566292 PCYOX1Q9UHG3 505 aa17.43■□□□□ 0.38
USB1-213ENST00000566292 COMMD10Q9Y6G5 202 aa17.43■□□□□ 0.38
USB1-213ENST00000566292 SCN3AQ9NY46 2000 aa17.42■□□□□ 0.38
USB1-213ENST00000566292 CPAMD8Q8IZJ3 1885 aa17.42■□□□□ 0.38
USB1-213ENST00000566292 HAT1O14929 419 aa17.42■□□□□ 0.38
USB1-213ENST00000566292 P2RX6O15547 441 aa17.42■□□□□ 0.38
USB1-213ENST00000566292 FOXS1O43638 330 aa17.42■□□□□ 0.38
USB1-213ENST00000566292 ZBTB14O43829 449 aa17.42■□□□□ 0.38
USB1-213ENST00000566292 BANF1O75531 89 aa17.42■□□□□ 0.38
USB1-213ENST00000566292 HPP00738 406 aa17.42■□□□□ 0.38
USB1-213ENST00000566292 ACPPP15309 386 aa17.42■□□□□ 0.38
USB1-213ENST00000566292 SNRPNP63162 240 aaKnown RBP17.42■□□□□ 0.38
USB1-213ENST00000566292 ABATP80404 500 aa17.42■□□□□ 0.38
USB1-213ENST00000566292 RELAQ04206 551 aa17.42■□□□□ 0.38
USB1-213ENST00000566292 DSG2Q14126 1118 aa17.42■□□□□ 0.38
USB1-213ENST00000566292 UBE2R2Q712K3 238 aaPredicted RBP17.42■□□□□ 0.38
USB1-213ENST00000566292 KCNMB4Q86W47 210 aa17.42■□□□□ 0.38
USB1-213ENST00000566292 PLD3Q8IV08 490 aa17.42■□□□□ 0.38
USB1-213ENST00000566292 AMER3Q8N944 861 aa17.42■□□□□ 0.38
USB1-213ENST00000566292 VPS50Q96JG6 964 aa17.42■□□□□ 0.38
USB1-213ENST00000566292 FAM167BQ9BTA0 163 aa17.42■□□□□ 0.38
USB1-213ENST00000566292 ZNF160Q9HCG1 818 aa17.42■□□□□ 0.38
USB1-213ENST00000566292 UTP6Q9NYH9 597 aaKnown RBP17.42■□□□□ 0.38
USB1-213ENST00000566292 TRPC4Q9UBN4 977 aa17.42■□□□□ 0.38
USB1-213ENST00000566292 CDC14AQ9UNH5 594 aa17.42■□□□□ 0.38
USB1-213ENST00000566292 NOVA2Q9UNW9 492 aaKnown RBP17.42■□□□□ 0.38
USB1-213ENST00000566292 COPG1Q9Y678 874 aaKnown RBP17.42■□□□□ 0.38
USB1-213ENST00000566292 DOPEY1Q5JWR5 2465 aa17.41■□□□□ 0.38
USB1-213ENST00000566292 IDSB3KWA1 339 aa17.41■□□□□ 0.38
USB1-213ENST00000566292 MAP2K7O14733 419 aa17.41■□□□□ 0.38
USB1-213ENST00000566292 KLHL18O94889 574 aa17.41■□□□□ 0.38
USB1-213ENST00000566292 COX6A1P12074 109 aa17.41■□□□□ 0.38
USB1-213ENST00000566292 SLC26A3P40879 764 aa17.41■□□□□ 0.38
USB1-213ENST00000566292 CRYMQ14894 314 aa17.41■□□□□ 0.38
USB1-213ENST00000566292 PPP1R7Q15435 360 aa17.41■□□□□ 0.38
USB1-213ENST00000566292 THEMIS2Q5TEJ8 643 aa17.41■□□□□ 0.38
USB1-213ENST00000566292 IRAK1BP1Q5VVH5 260 aa17.41■□□□□ 0.38
USB1-213ENST00000566292 GARNL3Q5VVW2 1013 aa17.41■□□□□ 0.38
USB1-213ENST00000566292 ADCK2Q7Z695 626 aa17.41■□□□□ 0.38
USB1-213ENST00000566292 C2CD4AQ8NCU7 369 aaPredicted RBP17.41■□□□□ 0.38
USB1-213ENST00000566292 RERGQ96A58 199 aaPredicted RBP17.41■□□□□ 0.38
USB1-213ENST00000566292 MMABQ96EY8 250 aaPredicted RBP17.41■□□□□ 0.38
USB1-213ENST00000566292 NDNQ99608 321 aa17.41■□□□□ 0.38
USB1-213ENST00000566292 PLEKHB1Q9UF11 243 aaPredicted RBP17.41■□□□□ 0.38
USB1-213ENST00000566292 ADAMTS6Q9UKP5 1117 aa17.41■□□□□ 0.38
USB1-213ENST00000566292 SNX12Q9UMY4 172 aa17.41■□□□□ 0.38
USB1-213ENST00000566292 POLEQ07864 2286 aa17.41■□□□□ 0.38
USB1-213ENST00000566292 ZGRF1Q86YA3 2104 aa17.41■□□□□ 0.38
USB1-213ENST00000566292 SVILO95425 2214 aa17.4■□□□□ 0.38
USB1-213ENST00000566292 A0A0A6YYC8 382 aaPredicted RBP17.4■□□□□ 0.38
USB1-213ENST00000566292 GOLGA6L10A0A0M3HER8 536 aa17.4■□□□□ 0.38
USB1-213ENST00000566292 H7BY64 318 aa17.4■□□□□ 0.38
USB1-213ENST00000566292 I3L1I5 382 aaPredicted RBP17.4■□□□□ 0.38
USB1-213ENST00000566292 EIF3FO00303 357 aaPredicted RBP17.4■□□□□ 0.38
USB1-213ENST00000566292 DNALI1O14645 258 aaPredicted RBP17.4■□□□□ 0.38
USB1-213ENST00000566292 PRPF4O43172 522 aaKnown RBP eCLIP17.4■□□□□ 0.38
USB1-213ENST00000566292 STATHP02808 62 aa17.4■□□□□ 0.38
USB1-213ENST00000566292 PGAM1P18669 254 aa17.4■□□□□ 0.38
USB1-213ENST00000566292 GABRB3P28472 473 aa17.4■□□□□ 0.38
USB1-213ENST00000566292 EFNA3P52797 238 aa17.4■□□□□ 0.38
USB1-213ENST00000566292 EMP2P54851 167 aa17.4■□□□□ 0.38
USB1-213ENST00000566292 DHX9Q08211 1270 aaKnown RBP17.4■□□□□ 0.38
USB1-213ENST00000566292 SYT16Q17RD7 645 aa17.4■□□□□ 0.38
USB1-213ENST00000566292 MSS51Q4VC12 460 aa17.4■□□□□ 0.38
USB1-213ENST00000566292 DNAJB14Q8TBM8 379 aa17.4■□□□□ 0.38
USB1-213ENST00000566292 EEF1AKMT1Q8WVE0 214 aa17.4■□□□□ 0.38
USB1-213ENST00000566292 PRAP1Q96NZ9 151 aa17.4■□□□□ 0.38
USB1-213ENST00000566292 YIPF2Q9BWQ6 316 aa17.4■□□□□ 0.38
USB1-213ENST00000566292 DRC3Q9H069 523 aa17.4■□□□□ 0.38
USB1-213ENST00000566292 DDX47Q9H0S4 455 aaKnown RBP17.4■□□□□ 0.38
USB1-213ENST00000566292 TRMT6Q9UJA5 497 aaKnown RBP17.4■□□□□ 0.38
USB1-213ENST00000566292 MRPS2Q9Y399 296 aaKnown RBP17.4■□□□□ 0.38
USB1-213ENST00000566292 UNC79Q9P2D8 2635 aa17.4■□□□□ 0.38
USB1-213ENST00000566292 SCN2AQ99250 2005 aa17.39■□□□□ 0.37
USB1-213ENST00000566292 A0A1W2PQ72 361 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms