RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	NPTX1	Q15818	432 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	DUOXA1	Q1HG43	343 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	RGS21	Q2M5E4	152 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	ADPRM	Q3LIE5	342 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	VTCN1	Q7Z7D3	282 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	SETD9	Q8NE22	299 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	FIBIN	Q8TAL6	211 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	YIPF6	Q96EC8	236 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	ASIC4	Q96FT7	647 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	ZNF641	Q96N77	438 aa	Predicted RBP	12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	BCL7B	Q9BQE9	202 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	RHNO1	Q9BSD3	238 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	RIBC2	Q9H4K1	309 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	AKIP1	Q9NQ31	210 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	DOLK	Q9UPQ8	538 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	EVPLL	A8MZ36	301 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	hCG_2039718	K7EN88	272 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	YY2	O15391	372 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	PCSK2	P16519	638 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	CD22	P20273	847 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	ITPKA	P23677	461 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	KDELR2	P33947	212 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	MAP2K4	P45985	399 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	MASP1	P48740	699 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	CCR3	P51677	355 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	IQCC	Q4KMZ1	466 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	C1orf53	Q5VUE5	145 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	CYP2U1	Q7Z449	544 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	BBS7	Q8IWZ6	715 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	CSGALNACT1	Q8TDX6	532 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	NELL1	Q92832	810 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	VMP1	Q96GC9	406 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	PANX1	Q96RD7	426 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	EBPL	Q9BY08	206 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	KIAA1522	Q9P206	1035 aa	Predicted RBP	12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	UPK3BL1	B0FP48	263 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	CLDN25	C9JDP6	229 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	UPK3BL2	E5RIL1	263 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	FPGT	O14772	594 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	JRK	O75564	520 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	JUP	P14923	745 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	HIST1H2AD	P20671	130 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	FPR1	P21462	350 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	DNAJA1	P31689	397 aa	Known RBP	12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	PFN3	P60673	137 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	RAB33A	Q14088	237 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	MPP7	Q5T2T1	576 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	SYT6	Q5T7P8	510 aa	Predicted RBP	12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	SERPINA13P	Q6UXR4	307 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	METTL3	Q86U44	580 aa	Known RBP	12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	CCDC71	Q8IV32	467 aa	Predicted RBP	12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	SKA2	Q8WVK7	121 aa	Predicted RBP	12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	RORB	Q92753	470 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	C11orf24	Q96F05	449 aa	Predicted RBP	12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	HIST1H2AH	Q96KK5	128 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	HIST1H2AJ	Q99878	128 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	H2AFJ	Q9BTM1	129 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	SUV39H2	Q9H5I1	410 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	DNAJC11	Q9NVH1	559 aa		12.75	□□□□□ -0.37
SCAPER-215	ENST00000565507	ABHD14A-ACY1	A0A1B0GW23	586 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	MYO1G	B0I1T2	1018 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507		E9PQ18	207 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	FGF18	O76093	207 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	FABP3	P05413	133 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	UROD	P06132	367 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	C1S	P09871	688 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	MPC1L	P0DKB6	136 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	SRSF11	Q05519	484 aa	Known RBP	12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	ABR	Q12979	859 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	CHIT1	Q13231	466 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	SMN1	Q16637	294 aa	Known RBP	12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	EGFLAM	Q63HQ2	1017 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	LINC00299	Q6ZSB3	139 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	USP45	Q70EL2	814 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	HTR3D	Q70Z44	454 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	CBLL1	Q75N03	491 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	RASGRP3	Q8IV61	690 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	TCEAL8	Q8IYN2	117 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	CPXM2	Q8N436	756 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	OR8J2	Q8NGG1	315 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	NDNF	Q8TB73	568 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	LMLN	Q96KR4	655 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	DPH2	Q9BQC3	489 aa	Predicted RBP	12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	NEURL2	Q9BR09	285 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	ATG10	Q9H0Y0	220 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	SPG21	Q9NZD8	308 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	TPRKB	Q9Y3C4	175 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	INSL5	Q9Y5Q6	135 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	VCAN	P13611	3396 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	HIDE1	A8MVS5	230 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	SLC22A1	O15245	554 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	TGM5	O43548	720 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	SYN1	P17600	705 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	EN2	P19622	333 aa	Predicted RBP	12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	ARHGDIA	P52565	204 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	CRYBA2	P53672	197 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	EPHB3	P54753	998 aa		12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	SNRPD1	P62314	119 aa	Known RBP	12.74	□□□□□ -0.37
SCAPER-215	ENST00000565507	SP140	Q13342	867 aa		12.74	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms