RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 HMBOX1Q6NT76 420 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 ARHGAP11AQ6P4F7 1023 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 PODNL1Q6PEZ8 512 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 TMEM205Q6UW68 189 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 GLT6D1Q7Z4J2 308 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 TBC1D21Q8IYX1 336 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 OR5M3Q8NGP4 307 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 OR5AR1Q8NGP9 310 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 SPATA22Q8NHS9 363 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 NAT14Q8WUY8 206 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 RAPGEF5Q92565 580 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 TADA1Q96BN2 335 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 ZNF285Q96NJ3 590 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 KCNK13Q9HB14 408 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 C14orf105Q9NVL8 296 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 CRIM1Q9NZV1 1036 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 TRPC4Q9UBN4 977 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 ZC3H7BQ9UGR2 993 aaKnown RBP8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 ASF1AQ9Y294 204 aa8.56□□□□□ -1.04
VPS9D1-205ENST00000565452 LOC285095A0A1B0GVY8 99 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 C3orf70A6NLC5 250 aaPredicted RBP8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 TARM1B6A8C7 271 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 SYT5O00445 386 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 GAPDHSO14556 408 aaPredicted RBP8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 TFECO14948 347 aaPredicted RBP8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 SMAD7O15105 426 aaKnown RBP8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 BUD23O43709 281 aaKnown RBP8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 CRLF1O75462 422 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 TJP3O95049 919 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 AP2A1O95782 977 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 CD48P09326 243 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 CDKN2BP42772 138 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 GBE1Q04446 702 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 SLC10A2Q12908 348 aaPredicted RBP8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 ZBTB17Q13105 803 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 SF1Q15637 639 aaKnown RBP8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 BTBD16Q32M84 506 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 SLC25A35Q3KQZ1 300 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 RNFT1Q5M7Z0 435 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 SLC9A4Q6AI14 798 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 FCRLBQ6BAA4 426 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 PLAG1Q6DJT9 500 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 PAOXQ6QHF9 649 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 UNC5DQ6UXZ4 953 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 CAPN12Q6ZSI9 719 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 CIARTQ8N365 385 aaPredicted RBP8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 BLOC1S5Q8TDH9 187 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 MAIP1Q8WWC4 291 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 TMEM125Q96AQ2 219 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 ULK4Q96C45 1275 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 LRRC46Q96FV0 321 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 COPS8Q99627 209 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 TGIF2Q9GZN2 237 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 MKKSQ9NPJ1 570 aaPredicted RBP8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 CAPN6Q9Y6Q1 641 aa8.55□□□□□ -1.04
VPS9D1-205ENST00000565452 A0A0U1RQJ8 604 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 C2orf81A6NN90 581 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 GABRR3A8MPY1 467 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 KLRC4-KLRK1H3BQV0 150 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 APOL1O14791 398 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 CDC40O60508 579 aaKnown RBP eCLIP8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 NEURL1O76050 574 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 SRP72O76094 671 aaKnown RBP8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 F12P00748 615 aaPredicted RBP8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 KRT1P04264 644 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 EIF2S1P05198 315 aaKnown RBP8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 ANXA5P08758 320 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 C8orf89P0DMQ9 161 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 TNNT1P13805 278 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 TFEBP19484 476 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 GJC1P36383 396 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 DCAF7P61962 342 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 PPIDQ08752 370 aaKnown RBP8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 PDK1Q15118 436 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 GXYLT1Q4G148 440 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 FLYWCH1Q4VC44 716 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 SIRPB2Q5JXA9 342 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 CATSPEREQ5SY80 951 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 MFSD7Q6UXD7 560 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 CPEB2Q7Z5Q1 589 aaKnown RBP8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 CPNE8Q86YQ8 564 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 KRTAP1-3Q8IUG1 177 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 CRLF3Q8IUI8 442 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 CCDC50Q8IVM0 306 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 SLC25A41Q8N5S1 370 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 SLC5A8Q8N695 610 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 OR5K2Q8NHB8 316 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 M1APQ8TC57 530 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 RNF25Q96BH1 459 aaPredicted RBP8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 MVB12AQ96EY5 273 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 PBKQ96KB5 322 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 FERMT1Q9BQL6 677 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 CEP41Q9BYV8 373 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 FRMD8P1Q9BZ68 369 aaPredicted RBP8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 OSBPL8Q9BZF1 889 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 GOLPH3Q9H4A6 298 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 GLOD4Q9HC38 313 aa8.54□□□□□ -1.04
VPS9D1-205ENST00000565452 DMRT3Q9NQL9 472 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms