RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 PDLIM3Q53GG5 364 aaPredicted RBP4.22□□□□□ -1.73
LINC00560-201ENST00000564593 LCN1P1Q5VSP4 162 aa4.22□□□□□ -1.73
LINC00560-201ENST00000564593 ARHGEF16Q5VV41 709 aa4.22□□□□□ -1.73
LINC00560-201ENST00000564593 G2E3Q7L622 706 aa4.22□□□□□ -1.73
LINC00560-201ENST00000564593 ANKRD33Q7Z3H0 272 aa4.22□□□□□ -1.73
LINC00560-201ENST00000564593 SNX32Q86XE0 403 aa4.22□□□□□ -1.73
LINC00560-201ENST00000564593 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.22□□□□□ -1.73
LINC00560-201ENST00000564593 DBF4BQ8NFT6 615 aa4.22□□□□□ -1.73
LINC00560-201ENST00000564593 OR7G3Q8NG95 312 aa4.22□□□□□ -1.73
LINC00560-201ENST00000564593 OR4C3Q8NH37 302 aa4.22□□□□□ -1.73
LINC00560-201ENST00000564593 NCOA7Q8NI08 942 aa4.22□□□□□ -1.73
LINC00560-201ENST00000564593 HPSE2Q8WWQ2 592 aa4.22□□□□□ -1.73
LINC00560-201ENST00000564593 TEKT1Q969V4 418 aa4.22□□□□□ -1.73
LINC00560-201ENST00000564593 SGF29Q96ES7 293 aa4.22□□□□□ -1.73
LINC00560-201ENST00000564593 NDNQ99608 321 aa4.22□□□□□ -1.73
LINC00560-201ENST00000564593 HNRNPABQ99729 332 aaKnown RBP4.22□□□□□ -1.73
LINC00560-201ENST00000564593 PPANQ9NQ55 473 aaKnown RBP4.22□□□□□ -1.73
LINC00560-201ENST00000564593 C19orf25Q9UFG5 118 aaPredicted RBP4.22□□□□□ -1.73
LINC00560-201ENST00000564593 LEF1Q9UJU2 399 aaPredicted RBP4.22□□□□□ -1.73
LINC00560-201ENST00000564593 RUVBL2Q9Y230 463 aaKnown RBP4.22□□□□□ -1.73
LINC00560-201ENST00000564593 C2CD2Q9Y426 696 aa4.22□□□□□ -1.73
LINC00560-201ENST00000564593 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 C17orf105B2RV13 164 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 TMEM150CB9EJG8 249 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 PRSS46E5RG02 174 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 FAM72CH0Y354 149 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 CCL24O00175 119 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 IKBKBO14920 756 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 ZNF263O14978 683 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 EPHB6O15197 1021 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 PCDH7O60245 1069 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 FMO6PO60774 539 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 GLRA3O75311 464 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 MOCS2O96007 188 aaPredicted RBP4.21□□□□□ -1.74
LINC00560-201ENST00000564593 ERVK-10P10266 1014 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 ITIH1P19827 911 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 CCND3P30281 292 aaPredicted RBP4.21□□□□□ -1.74
LINC00560-201ENST00000564593 SFTPDP35247 375 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 CETN2P41208 172 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 OPCMLQ14982 345 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 ZNF674Q2M3X9 581 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 GPR33Q49SQ1 333 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 GTDC1Q4AE62 458 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 ODF2Q5BJF6 829 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 FAM72AQ5TYM5 149 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 FAM46CQ5VWP2 391 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 FAM72DQ6L9T8 149 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 UGT3A1Q6NUS8 523 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 FUT10Q6P4F1 479 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 FAM72BQ86X60 149 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 CROCCP3Q8IVE0 287 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 KIRREL3Q8IZU9 778 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 CNBD1Q8NA66 436 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 UBLCP1Q8WVY7 318 aaPredicted RBP4.21□□□□□ -1.74
LINC00560-201ENST00000564593 METTL21AQ8WXB1 218 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 GIMAP5Q96F15 307 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 FAM49AQ9H0Q0 323 aaPredicted RBP4.21□□□□□ -1.74
LINC00560-201ENST00000564593 RNF121Q9H920 327 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 RAB9BQ9NP90 201 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 SLC52A3Q9NQ40 469 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 PHPT1Q9NRX4 125 aaPredicted RBP4.21□□□□□ -1.74
LINC00560-201ENST00000564593 GMEB2Q9UKD1 530 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 GRID1Q9ULK0 1009 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 LRP12Q9Y561 859 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 STK36Q9NRP7 1315 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 PRDM2Q13029 1718 aa4.21□□□□□ -1.74
LINC00560-201ENST00000564593 SDR42E2A6NKP2 422 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 KBTBD13C9JR72 458 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 BLOC1S5-TXNDC5H3BN57 136 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 KLF11O14901 512 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 CTDSPLO15194 276 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 CDK2AP2O75956 126 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 BAG3O95817 575 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 CLPTM1O96005 669 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 EEF2P13639 858 aaKnown RBP4.2□□□□□ -1.74
LINC00560-201ENST00000564593 SSTR1P30872 391 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 NPBWR1P48145 328 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 ST8SIA6P61647 398 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 ASIC1P78348 528 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 IL10RBQ08334 325 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 RCN2Q14257 317 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 SMU1Q2TAY7 513 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 XKR6Q5GH73 641 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 GLRA4Q5JXX5 417 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 TTC27Q6P3X3 843 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 PIGWQ7Z7B1 504 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 CREBRFQ8IUR6 639 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 OR7A2PQ8NGA2 310 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 SUSD6Q92537 303 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 C4orf45Q96LM5 186 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 CWC25Q9NXE8 425 aaPredicted RBP4.2□□□□□ -1.74
LINC00560-201ENST00000564593 SLCO1C1Q9NYB5 712 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 MAN1B1Q9UKM7 699 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 TCF19Q9Y242 345 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 IL16Q14005 1332 aa4.2□□□□□ -1.74
LINC00560-201ENST00000564593 TRMUO75648 421 aaKnown RBP4.19□□□□□ -1.74
LINC00560-201ENST00000564593 GPIP06744 558 aa4.19□□□□□ -1.74
LINC00560-201ENST00000564593 UMODP07911 640 aa4.19□□□□□ -1.74
LINC00560-201ENST00000564593 CD48P09326 243 aa4.19□□□□□ -1.74
LINC00560-201ENST00000564593 PRSS56P0CW18 603 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms