RNA–Protein interactions for RNA: ENST00000564590.5

SCAPER-212, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 2,507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-212ENST00000564590 RMI1Q9H9A7 625 aa13.54□□□□□ -0.24
SCAPER-212ENST00000564590 PFDN4Q9NQP4 134 aa13.54□□□□□ -0.24
SCAPER-212ENST00000564590 SIT1Q9Y3P8 196 aa13.54□□□□□ -0.24
SCAPER-212ENST00000564590 DNMT3AQ9Y6K1 912 aaPredicted RBP13.54□□□□□ -0.24
SCAPER-212ENST00000564590 IGKV1-8A0A0C4DH67 115 aa13.54□□□□□ -0.24
SCAPER-212ENST00000564590 CCDC154A6NI56 674 aa13.54□□□□□ -0.24
SCAPER-212ENST00000564590 RTCAO00442 366 aaKnown RBP13.54□□□□□ -0.24
SCAPER-212ENST00000564590 SLC22A2O15244 555 aa13.54□□□□□ -0.24
SCAPER-212ENST00000564590 SDC3O75056 442 aa13.54□□□□□ -0.24
SCAPER-212ENST00000564590 IGLV3-19P01714 112 aa13.54□□□□□ -0.24
SCAPER-212ENST00000564590 C1GALT1C1LP0DN25 315 aa13.54□□□□□ -0.24
SCAPER-212ENST00000564590 MTHFD1P11586 935 aaKnown RBP13.54□□□□□ -0.24
SCAPER-212ENST00000564590 GRIA3P42263 894 aa13.54□□□□□ -0.24
SCAPER-212ENST00000564590 SRSF5Q13243 272 aaKnown RBP13.54□□□□□ -0.24
SCAPER-212ENST00000564590 USP39Q53GS9 565 aaKnown RBP13.54□□□□□ -0.24
SCAPER-212ENST00000564590 MED27Q6P2C8 311 aa13.54□□□□□ -0.24
SCAPER-212ENST00000564590 NXPE4Q6UWF7 544 aa13.54□□□□□ -0.24
SCAPER-212ENST00000564590 BNC2Q6ZN30 1099 aaPredicted RBP13.54□□□□□ -0.24
SCAPER-212ENST00000564590 ANKRD53Q8N9V6 530 aa13.54□□□□□ -0.24
SCAPER-212ENST00000564590 PPM1MQ96MI6 270 aa13.54□□□□□ -0.24
SCAPER-212ENST00000564590 SYNPO2LQ9H987 977 aa13.54□□□□□ -0.24
SCAPER-212ENST00000564590 USP22Q9UPT9 525 aa13.54□□□□□ -0.24
SCAPER-212ENST00000564590 POMPQ9Y244 141 aa13.54□□□□□ -0.24
SCAPER-212ENST00000564590 FXYD1O00168 92 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 PPM1DO15297 605 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 MAP3K13O43283 966 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 DNAJA2O60884 412 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 APBB3O95704 486 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 C1QCP02747 245 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 SERPIND1P05546 499 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 C7P10643 843 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 PEBP1P30086 187 aaKnown RBP13.53□□□□□ -0.24
SCAPER-212ENST00000564590 RAB28P51157 221 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 MS4A2Q01362 244 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 IFNEQ86WN2 208 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 C17orf64Q86WR6 236 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 ZFAND4Q86XD8 727 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 PGAM4Q8N0Y7 254 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 SYNPOQ8N3V7 929 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 FBXW8Q8N3Y1 598 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 OR10G6Q8NH81 332 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 PYDC1Q8WXC3 89 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 ASB12Q8WXK4 309 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 VPS29Q9UBQ0 182 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 EIF3LQ9Y262 564 aaKnown RBP13.53□□□□□ -0.24
SCAPER-212ENST00000564590 CEP192Q8TEP8 1941 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 SPTY2D1-AS1A0A0U1RR47 76 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 PRORSD1PA6NEY8 169 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 H0YIV9 168 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 RPN2P04844 631 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 AMD1P17707 334 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 PI4KAP42356 2102 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 ATP4BP51164 291 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 PLCL1Q15111 1095 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 MAPRE2Q15555 327 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 C6orf10Q5SRN2 563 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 C16orf89Q6UX73 402 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 DGLUCYQ7Z3D6 616 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 VN1R5Q7Z5H4 357 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 TRIM73Q86UV7 250 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.53□□□□□ -0.24
SCAPER-212ENST00000564590 OR2A1Q8NGT9 310 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 CCT7Q99832 543 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 DPY30Q9C005 99 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 CHRDQ9H2X0 955 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 THEGQ9P2T0 379 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 PCDHGA11Q9Y5H2 935 aa13.53□□□□□ -0.24
SCAPER-212ENST00000564590 THADAQ6YHU6 1953 aa13.52□□□□□ -0.24
SCAPER-212ENST00000564590 PRAMEF10O60809 474 aa13.52□□□□□ -0.24
SCAPER-212ENST00000564590 RABIFP47224 123 aa13.52□□□□□ -0.24
SCAPER-212ENST00000564590 MTTPP55157 894 aa13.52□□□□□ -0.24
SCAPER-212ENST00000564590 ILF3Q12906 894 aaKnown RBP eCLIP13.52□□□□□ -0.24
SCAPER-212ENST00000564590 NFYCQ13952 458 aa13.52□□□□□ -0.24
SCAPER-212ENST00000564590 CCDC6Q16204 474 aa13.52□□□□□ -0.24
SCAPER-212ENST00000564590 PDCD4Q53EL6 469 aaKnown RBP13.52□□□□□ -0.24
SCAPER-212ENST00000564590 CACHD1Q5VU97 1274 aa13.52□□□□□ -0.24
SCAPER-212ENST00000564590 NOXRED1Q6NXP6 359 aa13.52□□□□□ -0.24
SCAPER-212ENST00000564590 PGM2L1Q6PCE3 622 aa13.52□□□□□ -0.24
SCAPER-212ENST00000564590 TMIGD1Q6UXZ0 262 aa13.52□□□□□ -0.24
SCAPER-212ENST00000564590 TAF8Q7Z7C8 310 aa13.52□□□□□ -0.24
SCAPER-212ENST00000564590 ARHGAP24Q8N264 748 aa13.52□□□□□ -0.24
SCAPER-212ENST00000564590 CXorf40BQ96DE9 158 aa13.52□□□□□ -0.24
SCAPER-212ENST00000564590 KLHDC7BQ96G42 594 aa13.52□□□□□ -0.24
SCAPER-212ENST00000564590 SLC6A13Q9NSD5 602 aa13.52□□□□□ -0.24
SCAPER-212ENST00000564590 PPT2Q9UMR5 302 aa13.52□□□□□ -0.24
SCAPER-212ENST00000564590 A0A1W2PP18 115 aa13.52□□□□□ -0.25
SCAPER-212ENST00000564590 LCMT2O60294 686 aaKnown RBP13.52□□□□□ -0.25
SCAPER-212ENST00000564590 ZNF217O75362 1048 aa13.52□□□□□ -0.25
SCAPER-212ENST00000564590 GSNP06396 782 aa13.52□□□□□ -0.25
SCAPER-212ENST00000564590 ERGP11308 486 aa13.52□□□□□ -0.25
SCAPER-212ENST00000564590 F3P13726 295 aa13.52□□□□□ -0.25
SCAPER-212ENST00000564590 CSNK1EP49674 416 aaKnown RBP13.52□□□□□ -0.25
SCAPER-212ENST00000564590 RAP1GDS1P52306 607 aa13.52□□□□□ -0.25
SCAPER-212ENST00000564590 PHC1P78364 1004 aa13.52□□□□□ -0.25
SCAPER-212ENST00000564590 ACSM2AQ08AH3 577 aa13.52□□□□□ -0.25
SCAPER-212ENST00000564590 SNCBQ16143 134 aa13.52□□□□□ -0.25
SCAPER-212ENST00000564590 HKDC1Q2TB90 917 aa13.52□□□□□ -0.25
SCAPER-212ENST00000564590 PGS1Q32NB8 556 aa13.52□□□□□ -0.25
SCAPER-212ENST00000564590 GTDC1Q4AE62 458 aa13.52□□□□□ -0.25
SCAPER-212ENST00000564590 ATG9BQ674R7 924 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms