RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 RERGQ96A58 199 aaPredicted RBP19.04■□□□□ 0.64
SHCBP1-203ENST00000564272 COL26A1Q96A83 441 aa19.04■□□□□ 0.64
SHCBP1-203ENST00000564272 CCDC138Q96M89 665 aa19.04■□□□□ 0.64
SHCBP1-203ENST00000564272 ATG10Q9H0Y0 220 aa19.04■□□□□ 0.64
SHCBP1-203ENST00000564272 DPH5Q9H2P9 285 aa19.04■□□□□ 0.64
SHCBP1-203ENST00000564272 PARVBQ9HBI1 364 aa19.04■□□□□ 0.64
SHCBP1-203ENST00000564272 ZNF304Q9HCX3 659 aa19.04■□□□□ 0.64
SHCBP1-203ENST00000564272 UTP6Q9NYH9 597 aaKnown RBP19.04■□□□□ 0.64
SHCBP1-203ENST00000564272 FBXL4Q9UKA2 621 aa19.04■□□□□ 0.64
SHCBP1-203ENST00000564272 SPENQ96T58 3664 aaKnown RBP19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 E7ESA3 106 aa19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 H7BY64 318 aa19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 AGPSO00116 658 aa19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 SOCS6O14544 535 aa19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 SLC16A5O15375 505 aa19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 STATHP02808 62 aa19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 MMP11P24347 488 aa19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 MGAT5Q09328 741 aa19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 FAM45BPQ6NSW5 357 aa19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 PRMT9Q6P2P2 845 aa19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 AGTRAPQ6RW13 159 aa19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 PRSS58Q8IYP2 241 aa19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 GALNT16Q8N428 558 aa19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 FAM45AQ8TCE6 357 aa19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 ALKBH8Q96BT7 664 aaKnown RBP19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 PRAP1Q96NZ9 151 aa19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 MFRPQ9BY79 579 aa19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 LUZP4Q9P127 313 aa19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 ZFATQ9P243 1243 aa19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 NXT1Q9UKK6 140 aaKnown RBP19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 CORO1CQ9ULV4 474 aaPredicted RBP19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 VWA7Q9Y334 891 aa19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 PCDHGB7Q9Y5F8 929 aa19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 HS3ST3B1Q9Y662 390 aa19.03■□□□□ 0.64
SHCBP1-203ENST00000564272 VSTM2BA6NLU5 285 aa19.02■□□□□ 0.64
SHCBP1-203ENST00000564272 FFAR3O14843 346 aa19.02■□□□□ 0.64
SHCBP1-203ENST00000564272 GPR42O15529 346 aa19.02■□□□□ 0.64
SHCBP1-203ENST00000564272 RAD51CO43502 376 aa19.02■□□□□ 0.64
SHCBP1-203ENST00000564272 IGHEP01854 428 aa19.02■□□□□ 0.64
SHCBP1-203ENST00000564272 FBLP22087 321 aaKnown RBP19.02■□□□□ 0.64
SHCBP1-203ENST00000564272 IL2P60568 153 aa19.02■□□□□ 0.64
SHCBP1-203ENST00000564272 SNRPNP63162 240 aaKnown RBP19.02■□□□□ 0.64
SHCBP1-203ENST00000564272 VWA5B1Q5TIE3 1220 aa19.02■□□□□ 0.64
SHCBP1-203ENST00000564272 CAPN12Q6ZSI9 719 aa19.02■□□□□ 0.64
SHCBP1-203ENST00000564272 ZBED8Q8IZ13 594 aa19.02■□□□□ 0.64
SHCBP1-203ENST00000564272 ARHGEF39Q8N4T4 335 aa19.02■□□□□ 0.64
SHCBP1-203ENST00000564272 SPATA4Q8NEY3 305 aa19.02■□□□□ 0.64
SHCBP1-203ENST00000564272 STT3BQ8TCJ2 826 aa19.02■□□□□ 0.64
SHCBP1-203ENST00000564272 MIB2Q96AX9 1013 aa19.02■□□□□ 0.64
SHCBP1-203ENST00000564272 SMAD5Q99717 465 aaKnown RBP19.02■□□□□ 0.64
SHCBP1-203ENST00000564272 MESP1Q9BRJ9 268 aa19.02■□□□□ 0.64
SHCBP1-203ENST00000564272 IKZF3Q9UKT9 509 aa19.02■□□□□ 0.64
SHCBP1-203ENST00000564272 FAM187AA6NFU0 413 aa19.01■□□□□ 0.63
SHCBP1-203ENST00000564272 DPM1O60762 260 aa19.01■□□□□ 0.63
SHCBP1-203ENST00000564272 SAT1P21673 171 aa19.01■□□□□ 0.63
SHCBP1-203ENST00000564272 CASQ1P31415 396 aa19.01■□□□□ 0.63
SHCBP1-203ENST00000564272 EMP3P54852 163 aa19.01■□□□□ 0.63
SHCBP1-203ENST00000564272 OCA2Q04671 838 aa19.01■□□□□ 0.63
SHCBP1-203ENST00000564272 KLC1Q07866 573 aa19.01■□□□□ 0.63
SHCBP1-203ENST00000564272 NAE1Q13564 534 aa19.01■□□□□ 0.63
SHCBP1-203ENST00000564272 RBBP7Q16576 425 aa19.01■□□□□ 0.63
SHCBP1-203ENST00000564272 STRA8Q7Z7C7 330 aa19.01■□□□□ 0.63
SHCBP1-203ENST00000564272 ZC3HC1Q86WB0 502 aaKnown RBP19.01■□□□□ 0.63
SHCBP1-203ENST00000564272 RBMXL3Q8N7X1 1067 aaKnown RBP19.01■□□□□ 0.63
SHCBP1-203ENST00000564272 BBOF1Q8ND07 529 aa19.01■□□□□ 0.63
SHCBP1-203ENST00000564272 MIEF2Q96C03 454 aa19.01■□□□□ 0.63
SHCBP1-203ENST00000564272 CRB3Q9BUF7 120 aa19.01■□□□□ 0.63
SHCBP1-203ENST00000564272 TMEM184CQ9NVA4 438 aa19.01■□□□□ 0.63
SHCBP1-203ENST00000564272 ZNF282Q9UDV7 671 aaPredicted RBP19.01■□□□□ 0.63
SHCBP1-203ENST00000564272 MRPS2Q9Y399 296 aaKnown RBP19.01■□□□□ 0.63
SHCBP1-203ENST00000564272 ASH1LQ9NR48 2969 aaKnown RBP19■□□□□ 0.63
SHCBP1-203ENST00000564272 PIAS1O75925 651 aa19■□□□□ 0.63
SHCBP1-203ENST00000564272 SORBS2O94875 1100 aaKnown RBP19■□□□□ 0.63
SHCBP1-203ENST00000564272 HIST1H2AGP0C0S8 130 aaPredicted RBP19■□□□□ 0.63
SHCBP1-203ENST00000564272 ZGLP1P0C6A0 271 aa19■□□□□ 0.63
SHCBP1-203ENST00000564272 HIST1H2ADP20671 130 aa19■□□□□ 0.63
SHCBP1-203ENST00000564272 RELAQ04206 551 aa19■□□□□ 0.63
SHCBP1-203ENST00000564272 ZNF460Q14592 562 aa19■□□□□ 0.63
SHCBP1-203ENST00000564272 MYBPC3Q14896 1274 aa19■□□□□ 0.63
SHCBP1-203ENST00000564272 ZXDCQ2QGD7 858 aaPredicted RBP19■□□□□ 0.63
SHCBP1-203ENST00000564272 VWA2Q5GFL6 755 aa19■□□□□ 0.63
SHCBP1-203ENST00000564272 KIRREL2Q6UWL6 708 aa19■□□□□ 0.63
SHCBP1-203ENST00000564272 TMEM207Q6UWW9 146 aa19■□□□□ 0.63
SHCBP1-203ENST00000564272 SYT10Q6XYQ8 523 aa19■□□□□ 0.63
SHCBP1-203ENST00000564272 AMER3Q8N944 861 aa19■□□□□ 0.63
SHCBP1-203ENST00000564272 HIST1H2AHQ96KK5 128 aa19■□□□□ 0.63
SHCBP1-203ENST00000564272 HIST1H2AJQ99878 128 aa19■□□□□ 0.63
SHCBP1-203ENST00000564272 ERP44Q9BS26 406 aa19■□□□□ 0.63
SHCBP1-203ENST00000564272 H2AFJQ9BTM1 129 aa19■□□□□ 0.63
SHCBP1-203ENST00000564272 SGPP1Q9BX95 441 aa19■□□□□ 0.63
SHCBP1-203ENST00000564272 PCBD2Q9H0N5 130 aa19■□□□□ 0.63
SHCBP1-203ENST00000564272 SEMA3GQ9NS98 782 aa19■□□□□ 0.63
SHCBP1-203ENST00000564272 ARL15Q9NXU5 204 aa19■□□□□ 0.63
SHCBP1-203ENST00000564272 MOCS1Q9NZB8 636 aa19■□□□□ 0.63
SHCBP1-203ENST00000564272 FLNBO75369 2602 aaKnown RBP19■□□□□ 0.63
SHCBP1-203ENST00000564272 IGLV3-12A0A075B6K2 115 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 A0A0A6YYC8 382 aaPredicted RBP18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 FAM95CA0A1B0GW59 222 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 TTLL8A6PVC2 850 aa18.99■□□□□ 0.63
SHCBP1-203ENST00000564272 I3L1I5 382 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms