RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 CASP6P55212 293 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 RWDD2BP57060 319 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 SESN2P58004 480 aaPredicted RBP11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 COPS2P61201 443 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 CSNK1G2P78368 415 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 ALDH6A1Q02252 535 aaKnown RBP11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 TUBA3CQ13748 450 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 DSG2Q14126 1118 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 TMED2Q15363 201 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 TESK1Q15569 626 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 PRTGQ2VWP7 1150 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 CTSL3PQ5NE16 218 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 YOD1Q5VVQ6 348 aaPredicted RBP11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 PRMT9Q6P2P2 845 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 TUBA3EQ6PEY2 450 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 CRLF3Q8IUI8 442 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 KLHDC8BQ8IXV7 354 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 ZCCHC10Q8TBK6 192 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 AGAP11Q8TF27 550 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 CHTF18Q8WVB6 975 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 VN1R1Q9GZP7 353 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 ETNK1Q9HBU6 452 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 MRPS30Q9NP92 439 aaKnown RBP11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 CHRAC1Q9NRG0 131 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 IL1RAPL1Q9NZN1 696 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 TAC3Q9UHF0 121 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 FEZ2Q9UHY8 353 aaPredicted RBP11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 MEMO1Q9Y316 297 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 PCDHGB6Q9Y5F9 930 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 ZNF407Q9C0G0 2248 aa11.06□□□□□ -0.64
NSMCE1-202ENST00000561960 IGLV3-12A0A075B6K2 115 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 OR2A25A4D2G3 310 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 NKX2-6A6NCS4 301 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 ZNF860A6NHJ4 632 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 FAM90A27PA6NNH2 459 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 SRPX2O60687 465 aaPredicted RBP11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 SLCO2B1O94956 709 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 TJP3O95049 919 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 SYF2O95926 243 aaKnown RBP11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 FTCDO95954 541 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 C8orf89P0DMQ9 161 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 ABOP16442 354 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 IL1RNP18510 177 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 CMPK1P30085 196 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 FMO4P31512 558 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 PTGER1P34995 402 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 RPA3P35244 121 aaPredicted RBP11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 SLC26A3P40879 764 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 PRRC2AP48634 2157 aaKnown RBP11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 SMSP52788 366 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 OC90Q02509 493 aaPredicted RBP11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 SNX1Q13596 522 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 OR1C1Q15619 314 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 INAQ16352 499 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 RNFT1Q5M7Z0 435 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 ZNF468Q5VIY5 522 aaPredicted RBP11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 TTC23LQ6PF05 361 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 XKRXQ6PP77 449 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 OTOAQ7RTW8 1153 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 GALNTL5Q7Z4T8 443 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 SPPL2CQ8IUH8 684 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 KIF2BQ8N4N8 673 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 TC2NQ8N9U0 490 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 ACRBPQ8NEB7 543 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 ZUFSPQ96AP4 578 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 RAD51AP1Q96B01 352 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 SDCCAG3Q96C92 435 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 CARD6Q9BX69 1037 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 KCNK13Q9HB14 408 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 TCAF1Q9Y4C2 921 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 DNAJC13O75165 2243 aa11.05□□□□□ -0.64
NSMCE1-202ENST00000561960 GRID2IPA4D2P6 1211 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 ARHGEF33A8MVX0 844 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 TARM1B6A8C7 271 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 E7EVH7 732 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 SGK494L7N484 410 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 CD3EAPO15446 510 aaKnown RBP11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 B3GALT4O96024 378 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 ZSCAN5DPP0CG00 497 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 NMBRP28336 390 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 SSTR2P30874 369 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 CD96P40200 585 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 PLOD1Q02809 727 aaPredicted RBP11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 CDH17Q12864 832 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 ACSBG2Q5FVE4 666 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 ACER2Q5QJU3 275 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 CEP128Q6ZU80 1094 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 FGD2Q7Z6J4 655 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 PAQR7Q86WK9 346 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 CNGA4Q8IV77 575 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 CPSF7Q8N684 471 aaKnown RBP11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 DNAJB8Q8NHS0 232 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 C1orf54Q8WWF1 131 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 TSLPQ969D9 159 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 IMMP1LQ96LU5 166 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 GPR137Q96N19 417 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 PKP4Q99569 1192 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 TTC1Q99614 292 aa11.04□□□□□ -0.64
NSMCE1-202ENST00000561960 PLCD4Q9BRC7 762 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms