RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 GPR37L1O60883 481 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 PEX11AO75192 247 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 RSL1D1O76021 490 aaKnown RBP8.29□□□□□ -1.08
TRAF3-209ENST00000560463 CHRM5P08912 532 aaPredicted RBP8.29□□□□□ -1.08
TRAF3-209ENST00000560463 ACPPP15309 386 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 CD22P20273 847 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 CALB2P22676 271 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 VARSP26640 1264 aaKnown RBP8.29□□□□□ -1.08
TRAF3-209ENST00000560463 MAPK1P28482 360 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 GRK3P35626 688 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 ACADVLP49748 655 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 HTR6P50406 440 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 MNAT1P51948 309 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 KLF10Q13118 480 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 SRSF5Q13243 272 aaKnown RBP8.29□□□□□ -1.08
TRAF3-209ENST00000560463 SLBPQ14493 270 aaKnown RBP eCLIP8.29□□□□□ -1.08
TRAF3-209ENST00000560463 NR6A1Q15406 480 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 MAPRE2Q15555 327 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 TCEA2Q15560 299 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 SF1Q15637 639 aaKnown RBP8.29□□□□□ -1.08
TRAF3-209ENST00000560463 KIF19Q2TAC6 998 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 TCHHL1Q5QJ38 904 aaPredicted RBP8.29□□□□□ -1.08
TRAF3-209ENST00000560463 CATSPEREQ5SY80 951 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 KLHL35Q6PF15 583 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 SLC23A3Q6PIS1 610 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 TMIGD1Q6UXZ0 262 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 ZFAND4Q86XD8 727 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 ADGRF3Q8IZF5 1079 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 C2orf73Q8N5S3 287 aaPredicted RBP8.29□□□□□ -1.08
TRAF3-209ENST00000560463 TTLQ8NG68 377 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 RP9Q8TA86 221 aaKnown RBP8.29□□□□□ -1.08
TRAF3-209ENST00000560463 PATE1Q8WXA2 126 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 PIGKQ92643 395 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 CMTM5Q96DZ9 223 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 CMTM7Q96FZ5 175 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 NSL1Q96IY1 281 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 LOXL4Q96JB6 756 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 CATSPER2Q96P56 530 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 SARGQ9BW04 601 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 ACAT2Q9BWD1 397 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 BRINP2Q9C0B6 783 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 RHBGQ9H310 441 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 XKR8Q9H6D3 395 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 ACTR5Q9H9F9 607 aaPredicted RBP8.29□□□□□ -1.08
TRAF3-209ENST00000560463 MRPS30Q9NP92 439 aaKnown RBP8.29□□□□□ -1.08
TRAF3-209ENST00000560463 FARSBQ9NSD9 589 aaKnown RBP8.29□□□□□ -1.08
TRAF3-209ENST00000560463 TMEM74BQ9NUR3 256 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 C1orf109Q9NX04 203 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 ASIC5Q9NY37 505 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 NOP53Q9NZM5 478 aaKnown RBP8.29□□□□□ -1.08
TRAF3-209ENST00000560463 VPS29Q9UBQ0 182 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 SNX7Q9UNH6 387 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 SLC12A4Q9UP95 1085 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 SH2B3Q9UQQ2 575 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 CCL27Q9Y4X3 112 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 SNX11Q9Y5W9 270 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 PTGDR2Q9Y5Y4 395 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 CAPN7Q9Y6W3 813 aa8.29□□□□□ -1.08
TRAF3-209ENST00000560463 PRAMEF33A0A0G2JMD5 474 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 ANKDD1BA6NHY2 528 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 LILRA5A6NI73 299 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 C2orf74A8MZ97 194 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 ISM1B1AKI9 464 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 NOBOXO60393 691 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 SEC22BO75396 215 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 UNC5CO95185 931 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 ALDOCP09972 364 aaKnown RBP8.28□□□□□ -1.08
TRAF3-209ENST00000560463 THRAP10827 490 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 ESRRAP11474 423 aaPredicted RBP8.28□□□□□ -1.08
TRAF3-209ENST00000560463 PRPS2P11908 318 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 PCNAP12004 261 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 EZRP15311 586 aaKnown RBP8.28□□□□□ -1.08
TRAF3-209ENST00000560463 PTX3P26022 381 aaPredicted RBP8.28□□□□□ -1.08
TRAF3-209ENST00000560463 PSMB5P28074 263 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 PEBP1P30086 187 aaKnown RBP8.28□□□□□ -1.08
TRAF3-209ENST00000560463 REEP5Q00765 189 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 BNC1Q01954 994 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 RELAQ04206 551 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 UBAP2LQ14157 1087 aaKnown RBP8.28□□□□□ -1.08
TRAF3-209ENST00000560463 HERC3Q15034 1050 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 RPS6KA2Q15349 733 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 SLC5A12Q1EHB4 618 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 AP5B1Q2VPB7 878 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 C14orf28Q4W4Y0 310 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 PDCD4Q53EL6 469 aaKnown RBP8.28□□□□□ -1.08
TRAF3-209ENST00000560463 SGO1Q5FBB7 561 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 C6orf132Q5T0Z8 1188 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 SCIMPQ6UWF3 145 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 OOSP2Q86WS3 158 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 MIER2Q8N344 545 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 ARL14Q8N4G2 192 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 FNDC5Q8NAU1 212 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 GPR156Q8NFN8 814 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 OR2L3Q8NG85 312 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 OR6C4Q8NGE1 309 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 OR2T11Q8NH01 316 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 HUS1BQ8NHY5 278 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 TSPEARQ8WU66 669 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 ZUFSPQ96AP4 578 aa8.28□□□□□ -1.08
TRAF3-209ENST00000560463 MTFMTQ96DP5 389 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms