RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 G3BP2Q9UN86 482 aaKnown RBP10.81□□□□□ -0.68
USP3-218ENST00000560202 CCL27Q9Y4X3 112 aa10.81□□□□□ -0.68
USP3-218ENST00000560202 CSNK1G3Q9Y6M4 447 aa10.81□□□□□ -0.68
USP3-218ENST00000560202 GON4LQ3T8J9 2241 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 SERTM1A2A2V5 107 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 PIPSLA2A3N6 862 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 FAM221BA6H8Z2 402 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 ISM1B1AKI9 464 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 H7BY64 318 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 UBDO15205 165 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 ATP5HO75947 161 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 CFIP05156 583 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 RPSAP08865 295 aaKnown RBP10.8□□□□□ -0.68
USP3-218ENST00000560202 FASLGP48023 281 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 CCR8P51685 355 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 MAZP56270 477 aaKnown RBP10.8□□□□□ -0.68
USP3-218ENST00000560202 ABATP80404 500 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 MRPS35P82673 323 aaKnown RBP10.8□□□□□ -0.68
USP3-218ENST00000560202 HMGCS1Q01581 520 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 MEF2AQ02078 507 aaPredicted RBP10.8□□□□□ -0.68
USP3-218ENST00000560202 GRIK2Q13002 908 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 NR6A1Q15406 480 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 SF1Q15637 639 aaKnown RBP10.8□□□□□ -0.68
USP3-218ENST00000560202 ATP6AP1LQ52LC2 224 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 C6orf136Q5SQH8 315 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.8□□□□□ -0.68
USP3-218ENST00000560202 RABEPKQ7Z6M1 372 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 C17orf82Q86X59 251 aaPredicted RBP10.8□□□□□ -0.68
USP3-218ENST00000560202 FAM129CQ86XR2 697 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 LAS2Q8IYD9 372 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 SLC25A45Q8N413 288 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 CPSF7Q8N684 471 aaKnown RBP10.8□□□□□ -0.68
USP3-218ENST00000560202 OR2L3Q8NG85 312 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 CEP76Q8TAP6 659 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 RNF217Q8TC41 542 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 SLC22A18Q96BI1 424 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 REPS1Q96D71 796 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 MARK4Q96L34 752 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 PRAP1Q96NZ9 151 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 CCDC106Q9BWC9 280 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 SPNS1Q9H2V7 528 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 ZNF385DQ9H6B1 395 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 C11orf16Q9NQ32 467 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 TTC28Q96AY4 2481 aa10.8□□□□□ -0.68
USP3-218ENST00000560202 A0A1B0GTQ1 180 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 OR6C74A6NCV1 312 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 CAPN14A8MX76 684 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 TNFRSF10AO00220 468 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 LSM1O15116 133 aaKnown RBP10.79□□□□□ -0.68
USP3-218ENST00000560202 PPM1DO15297 605 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 CCNDBP1O95273 360 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 ALDOCP09972 364 aaKnown RBP10.79□□□□□ -0.68
USP3-218ENST00000560202 PCNAP12004 261 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 POLR2CP19387 275 aaPredicted RBP10.79□□□□□ -0.68
USP3-218ENST00000560202 CXCR2P25025 360 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 CMPK1P30085 196 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 KIR2DS3Q14952 304 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 IMPG1Q17R60 797 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 ZNF423Q2M1K9 1284 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 HLA-BQ31612 363 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 OGFOD2Q6N063 350 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 SPATA19Q7Z5L4 167 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 ZNF761Q86XN6 746 aaPredicted RBP10.79□□□□□ -0.68
USP3-218ENST00000560202 TREML1Q86YW5 311 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 FAM20CQ8IXL6 584 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 KRT78Q8N1N4 520 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 ZNF740Q8NDX6 193 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 OR4K1Q8NGD4 311 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 OR10G6Q8NH81 332 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 UBE2E3Q969T4 207 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 PPP3R2Q96LZ3 170 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 AIF1LQ9BQI0 150 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 ACPTQ9BZG2 426 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 MRPS30Q9NP92 439 aaKnown RBP10.79□□□□□ -0.68
USP3-218ENST00000560202 FSCN3Q9NQT6 498 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 COPG1Q9Y678 874 aaKnown RBP10.79□□□□□ -0.68
USP3-218ENST00000560202 SPAG17Q6Q759 2223 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 FANCMQ8IYD8 2048 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 USP34Q70CQ2 3546 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 IGKV1-8A0A0C4DH67 115 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 GALR2O43603 387 aaPredicted RBP10.79□□□□□ -0.68
USP3-218ENST00000560202 EPHA8P29322 1005 aaPredicted RBP10.79□□□□□ -0.68
USP3-218ENST00000560202 ERVK-8P63133 956 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 CSNK1G2P78368 415 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 ROR2Q01974 943 aaKnown RBP10.79□□□□□ -0.68
USP3-218ENST00000560202 BNIP1Q12981 228 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 CSTF3Q12996 717 aaKnown RBP10.79□□□□□ -0.68
USP3-218ENST00000560202 DDX39BQ13838 428 aaKnown RBP10.79□□□□□ -0.68
USP3-218ENST00000560202 KRT72Q14CN4 511 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 LPAL2Q16609 132 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 SPRED3Q2MJR0 410 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 AP5B1Q2VPB7 878 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 C14orf28Q4W4Y0 310 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 C6orf132Q5T0Z8 1188 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 C10orf62Q5T681 223 aaPredicted RBP10.79□□□□□ -0.68
USP3-218ENST00000560202 ADNP2Q6IQ32 1131 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 TMIGD1Q6UXZ0 262 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 ADCK2Q7Z695 626 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 RNF175Q8N4F7 328 aa10.79□□□□□ -0.68
USP3-218ENST00000560202 FNDC5Q8NAU1 212 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms