RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 TMTC1Q8IUR5 882 aa8.45□□□□□ -1.06
SNRPA1-208ENST00000559686 SHISA5Q8N114 240 aa8.45□□□□□ -1.06
SNRPA1-208ENST00000559686 ZNF567Q8N184 647 aa8.45□□□□□ -1.06
SNRPA1-208ENST00000559686 CIARTQ8N365 385 aaPredicted RBP8.45□□□□□ -1.06
SNRPA1-208ENST00000559686 AMER3Q8N944 861 aa8.45□□□□□ -1.06
SNRPA1-208ENST00000559686 OR5M9Q8NGP3 310 aa8.45□□□□□ -1.06
SNRPA1-208ENST00000559686 OR5M3Q8NGP4 307 aa8.45□□□□□ -1.06
SNRPA1-208ENST00000559686 HEXDCQ8WVB3 486 aa8.45□□□□□ -1.06
SNRPA1-208ENST00000559686 METTL21AQ8WXB1 218 aa8.45□□□□□ -1.06
SNRPA1-208ENST00000559686 ZNF285Q96NJ3 590 aa8.45□□□□□ -1.06
SNRPA1-208ENST00000559686 CDCP1Q9H5V8 836 aa8.45□□□□□ -1.06
SNRPA1-208ENST00000559686 DMRT3Q9NQL9 472 aa8.45□□□□□ -1.06
SNRPA1-208ENST00000559686 C14orf105Q9NVL8 296 aa8.45□□□□□ -1.06
SNRPA1-208ENST00000559686 RSPH14Q9UHP6 348 aa8.45□□□□□ -1.06
SNRPA1-208ENST00000559686 EDARQ9UNE0 448 aa8.45□□□□□ -1.06
SNRPA1-208ENST00000559686 SCN2AQ99250 2005 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 JMJD1CQ15652 2540 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 A0A0A6YYC8 382 aaPredicted RBP8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 A0A1W2PQ72 361 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 AGAP14A8MT82 685 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 I3L1I5 382 aaPredicted RBP8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 PRMT3O60678 531 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 SRPX2O60687 465 aaPredicted RBP8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 SLC25A12O75746 678 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 NEURL1O76050 574 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 SUN1O94901 812 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 EPOP01588 193 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 STATHP02808 62 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 RAF1P04049 648 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 KRT1P04264 644 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 CYP1A2P05177 515 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 VAMP1P23763 118 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 ACRV1P26436 265 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 HOXC12P31275 282 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 UQCRC1P31930 480 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 YBX1P67809 324 aaKnown RBP8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 DBN1Q16643 649 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 HKDC1Q2TB90 917 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 MINDY4Q4G0A6 757 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 SLC9A4Q6AI14 798 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 PLAG1Q6DJT9 500 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 TMEM205Q6UW68 189 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 PAMR1Q6UXH9 720 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 CPEB2Q7Z5Q1 589 aaKnown RBP8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 CAMKMTQ7Z624 323 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 ZC3H7AQ8IWR0 971 aaKnown RBP8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 HORMAD2Q8N7B1 307 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 TFB1MQ8WVM0 346 aaKnown RBP8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 SLC22A18Q96BI1 424 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 HAUS1Q96CS2 278 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 MBD6Q96DN6 1003 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 DNAJC1Q96KC8 554 aaKnown RBP8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 FCRL5Q96RD9 977 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 DEFB127Q9H1M4 99 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 TP63Q9H3D4 680 aaPredicted RBP8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 MKKSQ9NPJ1 570 aaPredicted RBP8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 LUC7LQ9NQ29 371 aaKnown RBP8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 CRIM1Q9NZV1 1036 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 CTTNBP2NLQ9P2B4 639 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 SLC39A10Q9ULF5 831 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 MYO6Q9UM54 1294 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 CDC14AQ9UNH5 594 aa8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 RUVBL1Q9Y265 456 aaKnown RBP8.44□□□□□ -1.06
SNRPA1-208ENST00000559686 PHF3Q92576 2039 aaKnown RBP8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 IGLV3-16A0A075B6K0 115 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 A0A0U1RQJ8 604 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 C5orf60A6NFR6 353 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 A6NNC1 897 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 RNF212BA8MTL3 300 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 NPIPA2E9PIF3 369 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 NPIPA3F8WFD2 350 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 H0YGG7 62 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 H7C1Q1 480 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 SLC16A5O15375 505 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 PRPF4O43172 522 aaKnown RBP eCLIP8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 ATE1O95260 518 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 AVPP01185 164 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 PECAM1P16284 738 aaPredicted RBP8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 TFEBP19484 476 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 MMP16P51512 607 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 ZNF140P52738 457 aaPredicted RBP8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 ARF3P61204 181 aaPredicted RBP8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 NKX6-1P78426 367 aaPredicted RBP8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 MPP3Q13368 585 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 MESDQ14696 234 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 ODF2Q5BJF6 829 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 EMC4Q5J8M3 183 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 KAZNQ674X7 775 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 H3F3CQ6NXT2 135 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 WDR53Q7Z5U6 358 aaPredicted RBP8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 VRK3Q8IV63 474 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 LIX1LQ8IVB5 337 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 CCDC50Q8IVM0 306 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 CSNK1A1LQ8N752 337 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 MYRIPQ8NFW9 859 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 OR2L8Q8NGY9 312 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 MENTQ9BUN1 341 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 ACAT2Q9BWD1 397 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 VN1R1Q9GZP7 353 aa8.43□□□□□ -1.06
SNRPA1-208ENST00000559686 NUP62CLQ9H1M0 184 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms