RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 KLHDC1Q8N7A1 406 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 BMPERQ8N8U9 685 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 OR1J1Q8NGS3 322 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 FGFBP3Q8TAT2 258 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 KIAA1524Q8TCG1 905 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 METTL21AQ8WXB1 218 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 FAM46BQ96A09 425 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 SYAP1Q96A49 352 aaPredicted RBP2.15□□□□□ -2.07
GABPB1-209ENST00000559100 RFT1Q96AA3 541 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 ULK4Q96C45 1275 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 HMCESQ96FZ2 354 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 ADGRG7Q96K78 797 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 SGK494Q96LW2 274 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 TSSK2Q96PF2 358 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 ZNF385AQ96PM9 386 aaKnown RBP2.15□□□□□ -2.07
GABPB1-209ENST00000559100 PKP2Q99959 881 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 DDX50Q9BQ39 737 aaKnown RBP2.15□□□□□ -2.07
GABPB1-209ENST00000559100 CCDC3Q9BQI4 270 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 RTP3Q9BQQ7 232 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 FAM213AQ9BRX8 229 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 SLC29A3Q9BZD2 475 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 RAB6CQ9H0N0 254 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 RPF1Q9H9Y2 349 aaKnown RBP2.15□□□□□ -2.07
GABPB1-209ENST00000559100 UPF2Q9HAU5 1272 aaKnown RBP2.15□□□□□ -2.07
GABPB1-209ENST00000559100 LRRC4Q9HBW1 653 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 GPN1Q9HCN4 374 aaPredicted RBP2.15□□□□□ -2.07
GABPB1-209ENST00000559100 CHST11Q9NPF2 352 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 TCF7L2Q9NQB0 619 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 PHPT1Q9NRX4 125 aaPredicted RBP2.15□□□□□ -2.07
GABPB1-209ENST00000559100 FAM207AQ9NSI2 230 aaPredicted RBP2.15□□□□□ -2.07
GABPB1-209ENST00000559100 ECHDC1Q9NTX5 307 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 TMEM30AQ9NV96 361 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 P4HTMQ9NXG6 502 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 DONSONQ9NYP3 566 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 EPS15L1Q9UBC2 864 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 BLOC1S6Q9UL45 172 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 SLC7A7Q9UM01 511 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 STUB1Q9UNE7 303 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 KCNJ14Q9UNX9 436 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 PLA2G4CQ9UP65 541 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 DLGAP4Q9Y2H0 992 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 NSG2Q9Y328 171 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 PCDHAC2Q9Y5I4 1007 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 TEX264Q9Y6I9 313 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 COLEC10Q9Y6Z7 277 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 ATP8B3O60423 1300 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 ZNF521Q96K83 1311 aa2.15□□□□□ -2.07
GABPB1-209ENST00000559100 TRAV18A0A075B6X5 111 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 C2orf92A0A1B0GVN3 265 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 RGSL1A5PLK6 1076 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 CFAP73A6NFT4 308 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 C17orf105B2RV13 164 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 TLR4O00206 839 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 GRAP2O75791 330 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 PDE9AO76083 593 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 LETM1O95202 739 aaPredicted RBP2.14□□□□□ -2.07
GABPB1-209ENST00000559100 CAVIN2O95810 425 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 BAG3O95817 575 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 TGFAP01135 160 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 HEXBP07686 556 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 DLATP10515 647 aaKnown RBP2.14□□□□□ -2.07
GABPB1-209ENST00000559100 DARSP14868 501 aaKnown RBP2.14□□□□□ -2.07
GABPB1-209ENST00000559100 ZNF23P17027 643 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 GOT1P17174 413 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 CCNA2P20248 432 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 ALDH1B1P30837 517 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 ARRB2P32121 409 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 CHRNA3P32297 505 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 CSTF2P33240 577 aaKnown RBP eCLIP2.14□□□□□ -2.07
GABPB1-209ENST00000559100 NKX2-1P43699 371 aaPredicted RBP2.14□□□□□ -2.07
GABPB1-209ENST00000559100 VAMP7P51809 220 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 HNRNPFP52597 415 aaKnown RBP2.14□□□□□ -2.07
GABPB1-209ENST00000559100 HUNKP57058 714 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 STARD6P59095 220 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 KLHL30Q0D2K2 578 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 TRAP1Q12931 704 aaKnown RBP2.14□□□□□ -2.07
GABPB1-209ENST00000559100 TAF10Q12962 218 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 TRAF3Q13114 568 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 SNTA1Q13424 505 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 NFATC4Q14934 902 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 STXBP2Q15833 593 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 INAQ16352 499 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 ITPRIPL2Q3MIP1 535 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 ZNF542PQ5EBM4 170 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 ARMCX4Q5H9R4 360 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 SIRPB2Q5JXA9 342 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 STXBP5Q5T5C0 1151 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 LCE1EQ5T753 118 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 OR6B2Q6IFH4 312 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 GALNT17Q6IS24 598 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 ZNF425Q6IV72 752 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 ZNF549Q6P9A3 640 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 B3GLCTQ6Y288 498 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 SIGLEC15Q6ZMC9 328 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 WDR88Q6ZMY6 472 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 RBM43Q6ZSC3 357 aaKnown RBP2.14□□□□□ -2.07
GABPB1-209ENST00000559100 TAF8Q7Z7C8 310 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 ASPGQ86U10 573 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 LCA5Q86VQ0 697 aa2.14□□□□□ -2.07
GABPB1-209ENST00000559100 ZNF575Q86XF7 245 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms