RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 SEMA3GQ9NS98 782 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 UTP6Q9NYH9 597 aaKnown RBP16.21■□□□□ 0.19
LRRC28-210ENST00000558879 CDC23Q9UJX2 597 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 CORO1CQ9ULV4 474 aaPredicted RBP16.21■□□□□ 0.19
LRRC28-210ENST00000558879 CHMP2BQ9UQN3 213 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 PDE10AQ9Y233 779 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 MAP4K5Q9Y4K4 846 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 SAR1BQ9Y6B6 198 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 COL12A1Q99715 3063 aa16.21■□□□□ 0.19
LRRC28-210ENST00000558879 TTLL8A6PVC2 850 aa16.2■□□□□ 0.18
LRRC28-210ENST00000558879 TTI1O43156 1089 aa16.2■□□□□ 0.18
LRRC28-210ENST00000558879 KLHL41O60662 606 aa16.2■□□□□ 0.18
LRRC28-210ENST00000558879 SEC31AO94979 1220 aaKnown RBP16.2■□□□□ 0.18
LRRC28-210ENST00000558879 EIF2S1P05198 315 aaKnown RBP16.2■□□□□ 0.18
LRRC28-210ENST00000558879 C8GP07360 202 aa16.2■□□□□ 0.18
LRRC28-210ENST00000558879 RGS4P49798 205 aa16.2■□□□□ 0.18
LRRC28-210ENST00000558879 KLC1Q07866 573 aa16.2■□□□□ 0.18
LRRC28-210ENST00000558879 AIMP2Q13155 320 aaKnown RBP16.2■□□□□ 0.18
LRRC28-210ENST00000558879 DSG2Q14126 1118 aa16.2■□□□□ 0.18
LRRC28-210ENST00000558879 FRG1Q14331 258 aaKnown RBP16.2■□□□□ 0.18
LRRC28-210ENST00000558879 TEDDM1Q5T9Z0 273 aa16.2■□□□□ 0.18
LRRC28-210ENST00000558879 GARNL3Q5VVW2 1013 aa16.2■□□□□ 0.18
LRRC28-210ENST00000558879 TRMT10BQ6PF06 316 aaKnown RBP16.2■□□□□ 0.18
LRRC28-210ENST00000558879 PAQR3Q6TCH7 311 aa16.2■□□□□ 0.18
LRRC28-210ENST00000558879 KIRREL2Q6UWL6 708 aa16.2■□□□□ 0.18
LRRC28-210ENST00000558879 SHISA6Q6ZSJ9 500 aa16.2■□□□□ 0.18
LRRC28-210ENST00000558879 ATCAYQ86WG3 371 aa16.2■□□□□ 0.18
LRRC28-210ENST00000558879 CSNK1A1LQ8N752 337 aa16.2■□□□□ 0.18
LRRC28-210ENST00000558879 CABS1Q96KC9 395 aa16.2■□□□□ 0.18
LRRC28-210ENST00000558879 ATP13A2Q9NQ11 1180 aa16.2■□□□□ 0.18
LRRC28-210ENST00000558879 CCDC177Q9NQR7 707 aaPredicted RBP16.2■□□□□ 0.18
LRRC28-210ENST00000558879 ZNF282Q9UDV7 671 aaPredicted RBP16.2■□□□□ 0.18
LRRC28-210ENST00000558879 A0A1W2PQ72 361 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 E7ESA3 106 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 SLC16A5O15375 505 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 PRPF4O43172 522 aaKnown RBP eCLIP16.19■□□□□ 0.18
LRRC28-210ENST00000558879 FOXS1O43638 330 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 ALOX12BO75342 701 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 IPO13O94829 963 aaKnown RBP16.19■□□□□ 0.18
LRRC28-210ENST00000558879 ALPPP05187 535 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 ZGLP1P0C6A0 271 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 FBLP22087 321 aaKnown RBP16.19■□□□□ 0.18
LRRC28-210ENST00000558879 FDXRP22570 491 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 CARSP49589 748 aaKnown RBP16.19■□□□□ 0.18
LRRC28-210ENST00000558879 ITGA8P53708 1063 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 CBLBQ13191 982 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 HIF1AQ16665 826 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 PHKG1Q16816 387 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 TUBB8Q3ZCM7 444 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 PRR30Q53SZ7 412 aaPredicted RBP16.19■□□□□ 0.18
LRRC28-210ENST00000558879 PRAMEF13Q5VWM6 474 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 MBOAT1Q6ZNC8 495 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 MYO1HQ8N1T3 1032 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 AMER3Q8N944 861 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 GALNT11Q8NCW6 608 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 OR11G2Q8NGC1 345 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 COL26A1Q96A83 441 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 LINGO1Q96FE5 620 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 SNF8Q96H20 258 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 CCDC138Q96M89 665 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 CRB3Q9BUF7 120 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 SH2B3Q9UQQ2 575 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 ZGRF1Q86YA3 2104 aa16.19■□□□□ 0.18
LRRC28-210ENST00000558879 PRRC2CQ9Y520 2896 aaKnown RBP16.19■□□□□ 0.18
LRRC28-210ENST00000558879 HRH2P25021 359 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 SLC26A3P40879 764 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 UQCRFS1P47985 274 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 SNRPNP63162 240 aaKnown RBP16.18■□□□□ 0.18
LRRC28-210ENST00000558879 OCA2Q04671 838 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 UBAP2LQ14157 1087 aaKnown RBP16.18■□□□□ 0.18
LRRC28-210ENST00000558879 INPP5JQ15735 1006 aaPredicted RBP16.18■□□□□ 0.18
LRRC28-210ENST00000558879 RBBP7Q16576 425 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 THEMIS2Q5TEJ8 643 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 FAM45BPQ6NSW5 357 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 IGFL2Q6UWQ7 119 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 VN1R4Q7Z5H5 301 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 PLD3Q8IV08 490 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 FAM45AQ8TCE6 357 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 MCOLN3Q8TDD5 553 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 RERGQ96A58 199 aaPredicted RBP16.18■□□□□ 0.18
LRRC28-210ENST00000558879 MIEF2Q96C03 454 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 CFAP36Q96G28 342 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 OLFM1Q99784 485 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 MESP1Q9BRJ9 268 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 SGPP1Q9BX95 441 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 MFRPQ9BY79 579 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 DRC3Q9H069 523 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 PARVBQ9HBI1 364 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 TMEM184CQ9NVA4 438 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 C14orf105Q9NVL8 296 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 LUZP4Q9P127 313 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 RNF14Q9UBS8 474 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 CDC14AQ9UNH5 594 aa16.18■□□□□ 0.18
LRRC28-210ENST00000558879 ICE1Q9Y2F5 2266 aa16.17■□□□□ 0.18
LRRC28-210ENST00000558879 H7BY64 318 aa16.17■□□□□ 0.18
LRRC28-210ENST00000558879 TXNDC9O14530 226 aa16.17■□□□□ 0.18
LRRC28-210ENST00000558879 CCND1P24385 295 aa16.17■□□□□ 0.18
LRRC28-210ENST00000558879 ITGA3P26006 1051 aa16.17■□□□□ 0.18
LRRC28-210ENST00000558879 ARL4CP56559 192 aa16.17■□□□□ 0.18
LRRC28-210ENST00000558879 RPS15AP62244 130 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms