RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 C1QTNF7Q9BXJ2 289 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 ACPTQ9BZG2 426 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 ACTL8Q9H568 366 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 CAAP1Q9H8G2 361 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 EFCAB1Q9HAE3 211 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 LMAN1LQ9HAT1 526 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 FGF22Q9HCT0 170 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 MRPL40Q9NQ50 206 aaKnown RBP7.13□□□□□ -1.27
SPG11-204ENST00000557866 ITM2CQ9NQX7 267 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 MRGBPQ9NV56 204 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 RIC8BQ9NVN3 520 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 NKX1-2Q9UD57 310 aaPredicted RBP7.13□□□□□ -1.27
SPG11-204ENST00000557866 EGFL7Q9UHF1 273 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 BAIAP2L1Q9UHR4 511 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 FOXD3Q9UJU5 478 aaPredicted RBP7.13□□□□□ -1.27
SPG11-204ENST00000557866 ZNF490Q9ULM2 529 aaPredicted RBP7.13□□□□□ -1.27
SPG11-204ENST00000557866 PNMA8BQ9ULN7 279 aaPredicted RBP7.13□□□□□ -1.27
SPG11-204ENST00000557866 CA14Q9ULX7 337 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 SUFUQ9UMX1 484 aa7.13□□□□□ -1.27
SPG11-204ENST00000557866 CFAP20Q9Y6A4 193 aaKnown RBP7.13□□□□□ -1.27
SPG11-204ENST00000557866 LRRK1Q38SD2 2015 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 PABPN1LA6NDY0 278 aaKnown RBP7.12□□□□□ -1.27
SPG11-204ENST00000557866 CHURC1-FNTBB4DL54 471 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 NPIPB8E9PQR5 432 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 H0Y8X5 98 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 NR5A2O00482 541 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 MAN2B1O00754 1011 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 SCAMP1O15126 338 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 RGS14O43566 566 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 EIF4EBP3O60516 100 aaPredicted RBP7.12□□□□□ -1.27
SPG11-204ENST00000557866 UGDHO60701 494 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 SEMA4FO95754 770 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 IGLV3-19P01714 112 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 KRT6AP02538 564 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 KRT6BP04259 564 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 ERGP11308 486 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 SLC2A4P14672 509 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 JUPP14923 745 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 NPPBP16860 134 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 RPL10P27635 214 aaKnown RBP7.12□□□□□ -1.27
SPG11-204ENST00000557866 HALP42357 657 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 CASP2P42575 452 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 KRT6CP48668 564 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 CLCNKAP51800 687 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 PNLIPRP1P54315 467 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 MTTPP55157 894 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 KIAA1024LP59773 190 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 STX1BP61266 288 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 PSME3P61289 254 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 TBPL1P62380 186 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 YBX1P67809 324 aaKnown RBP7.12□□□□□ -1.27
SPG11-204ENST00000557866 IRX1P78414 480 aaPredicted RBP7.12□□□□□ -1.27
SPG11-204ENST00000557866 IRF8Q02556 426 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 GRIK2Q13002 908 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 PRKG2Q13237 762 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 ART3Q13508 389 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 E2F2Q14209 437 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 CLCA4Q14CN2 919 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 MAPRE2Q15555 327 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 ZNF423Q2M1K9 1284 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 VPS26BQ4G0F5 336 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 PIGGQ5H8A4 983 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 LCE3BQ5TA77 95 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 LIPJQ5W064 366 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 ADNP2Q6IQ32 1131 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 GRHL2Q6ISB3 625 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 DUS1LQ6P1R4 473 aaKnown RBP7.12□□□□□ -1.27
SPG11-204ENST00000557866 CYP20A1Q6UW02 462 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 SUSD1Q6UWL2 747 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 C16orf89Q6UX73 402 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 HACD2Q6Y1H2 254 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 ZNF852Q6ZMS4 543 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 GCNT7Q6ZNI0 430 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 CHST15Q7LFX5 561 aaPredicted RBP7.12□□□□□ -1.27
SPG11-204ENST00000557866 ZFAND4Q86XD8 727 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 MYLK4Q86YV6 388 aaPredicted RBP7.12□□□□□ -1.27
SPG11-204ENST00000557866 HPS6Q86YV9 775 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 DCUN1D3Q8IWE4 304 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 PGAM4Q8N0Y7 254 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 GJD3Q8N144 294 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 ARHGAP24Q8N264 748 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 C2orf73Q8N5S3 287 aaPredicted RBP7.12□□□□□ -1.27
SPG11-204ENST00000557866 DENND6BQ8NEG7 585 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 WDR20Q8TBZ3 569 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 SELENOMQ8WWX9 145 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 TFGQ92734 400 aaPredicted RBP7.12□□□□□ -1.27
SPG11-204ENST00000557866 APIPQ96GX9 242 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 PPP3R2Q96LZ3 170 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 CDRT15Q96T59 188 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 SLC25A23Q9BV35 468 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 MRPL1Q9BYD6 325 aaKnown RBP7.12□□□□□ -1.27
SPG11-204ENST00000557866 C6orf106Q9H6K1 298 aaPredicted RBP7.12□□□□□ -1.27
SPG11-204ENST00000557866 RMI1Q9H9A7 625 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 WDR41Q9HAD4 459 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 LRTM1Q9HBL6 345 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 SGK2Q9HBY8 427 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 PFDN4Q9NQP4 134 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 ZIM2Q9NZV7 527 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 ACSL5Q9ULC5 683 aa7.12□□□□□ -1.27
SPG11-204ENST00000557866 PSMD13Q9UNM6 376 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms