RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 NAE1Q13564 534 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 TSTA3Q13630 321 aaPredicted RBP17.15■□□□□ 0.34
XRCC3-218ENST00000557439 DOC2AQ14183 400 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 HKDC1Q2TB90 917 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 TMEM236Q5W0B7 351 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 LZICQ8WZA0 190 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 CORO1BQ9BR76 489 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 TRIT1Q9H3H1 467 aaKnown RBP17.15■□□□□ 0.34
XRCC3-218ENST00000557439 GMPPBQ9Y5P6 360 aa17.15■□□□□ 0.34
XRCC3-218ENST00000557439 MAGEB17A8MXT2 336 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 GFYI3L273 518 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 TGM5O43548 720 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 OPN1SWP03999 348 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 CCR2P41597 374 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 CYP2A13Q16696 494 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 ADPRMQ3LIE5 342 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 CYP27C1Q4G0S4 372 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 HORMAD1Q86X24 394 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 GALNT13Q8IUC8 556 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 TMCO5AQ8N6Q1 288 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 PXYLP1Q8TE99 480 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 RPL3LQ92901 407 aaKnown RBP17.14■□□□□ 0.33
XRCC3-218ENST00000557439 MAGED4Q96JG8 741 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 COX4I2Q96KJ9 171 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 ZNF641Q96N77 438 aaPredicted RBP17.14■□□□□ 0.33
XRCC3-218ENST00000557439 MCCC1Q96RQ3 725 aaPredicted RBP17.14■□□□□ 0.33
XRCC3-218ENST00000557439 SAMD4AQ9UPU9 718 aaKnown RBP17.14■□□□□ 0.33
XRCC3-218ENST00000557439 CFAP99D6REC4 459 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 EPN2O95208 641 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 FABP3P05413 133 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 JUPP14923 745 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 ITIH1P19827 911 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 PSMB9P28065 219 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 WEE1P30291 646 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 RYKP34925 604 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 CTSCP53634 463 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 GGTA1PQ4G0N0 100 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 PERM1Q5SV97 790 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 TTC29Q8NA56 475 aaPredicted RBP17.14■□□□□ 0.33
XRCC3-218ENST00000557439 ATG16L2Q8NAA4 619 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 CYB5D2Q8WUJ1 264 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 LMLNQ96KR4 655 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 DEFB118Q96PH6 123 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 OR4K3Q96R72 315 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 AMBNQ9NP70 447 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 COQ6Q9Y2Z9 468 aa17.14■□□□□ 0.33
XRCC3-218ENST00000557439 CHD7Q9P2D1 2997 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 FADS2P1A8MWK0 482 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 CYP2A7P20853 494 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 NCS1P62166 190 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 KDM4DQ6B0I6 523 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 ANGPTL8Q6UXH0 198 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 SLCO6A1Q86UG4 719 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 THOC6Q86W42 341 aaKnown RBP17.13■□□□□ 0.33
XRCC3-218ENST00000557439 TMC8Q8IU68 726 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 C1orf52Q8N6N3 182 aaKnown RBP17.13■□□□□ 0.33
XRCC3-218ENST00000557439 ZFP90Q8TF47 636 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 HHIPQ96QV1 700 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 TMEM184CQ9NVA4 438 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 NAALAD2Q9Y3Q0 740 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 UNC80Q8N2C7 3258 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 ZBBXA8MT70 800 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 TSPAN6O43657 245 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 CXCL10P02778 98 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 CD300CQ08708 224 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 MTAPQ13126 283 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 GAB1Q13480 694 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 EGFLAMQ63HQ2 1017 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 METTL2BQ6P1Q9 378 aaKnown RBP17.13■□□□□ 0.33
XRCC3-218ENST00000557439 SERPINA11Q86U17 422 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 ZNF540Q8NDQ6 660 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 GLMNQ92990 594 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 RIOK2Q9BVS4 552 aaKnown RBP17.13■□□□□ 0.33
XRCC3-218ENST00000557439 TMEM121BQ9BXQ6 578 aaPredicted RBP17.13■□□□□ 0.33
XRCC3-218ENST00000557439 LINC00597Q9H2U6 94 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 TPT1P8Q9HAU6 139 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 KIF17Q9P2E2 1029 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 VPS29Q9UBQ0 182 aa17.13■□□□□ 0.33
XRCC3-218ENST00000557439 PNMA8BQ9ULN7 279 aaPredicted RBP17.13■□□□□ 0.33
XRCC3-218ENST00000557439 GABRR3A8MPY1 467 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 SAP18O00422 153 aaKnown RBP17.12■□□□□ 0.33
XRCC3-218ENST00000557439 ITGAMP11215 1152 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 PRPS1L1P21108 318 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 FUT4P22083 530 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 MAPK1P28482 360 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 CREMQ03060 361 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.12■□□□□ 0.33
XRCC3-218ENST00000557439 ZNF852Q6ZMS4 543 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 RORBQ92753 470 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 TCEAL4Q96EI5 215 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 SH3YL1Q96HL8 342 aaPredicted RBP17.12■□□□□ 0.33
XRCC3-218ENST00000557439 TM9SF3Q9HD45 589 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 THUMPD1Q9NXG2 353 aaKnown RBP17.12■□□□□ 0.33
XRCC3-218ENST00000557439 SELENONQ9NZV5 590 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 RAPGEFL1Q9UHV5 662 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 HS3ST2Q9Y278 367 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 ZNF510Q9Y2H8 683 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 FUOMA2VDF0 154 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 CCL16O15467 120 aa17.12■□□□□ 0.33
XRCC3-218ENST00000557439 UGT2B11O75310 529 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms