RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 MGAT1P26572 445 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 HTR1EP28566 365 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 RPL22P35268 128 aaKnown RBP13.36□□□□□ -0.27
SLIRP-210ENST00000557431 PPARGP37231 505 aaPredicted RBP13.36□□□□□ -0.27
SLIRP-210ENST00000557431 CA7P43166 264 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 TTPAP49638 278 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 ZNF75DP51815 510 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 ADORA2A-AS1P86434 159 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 ZNF33BQ06732 778 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 ART3Q13508 389 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 DSG2Q14126 1118 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 KCNJ11Q14654 390 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 C3AR1Q16581 482 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 ACSBG2Q5FVE4 666 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 AARS2Q5JTZ9 985 aaKnown RBP13.36□□□□□ -0.27
SLIRP-210ENST00000557431 PCID2Q5JVF3 399 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 TMEM207Q6UWW9 146 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 PRSS41Q7RTY9 318 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 ADCK2Q7Z695 626 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 RAB42Q8N4Z0 105 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 OR9A1PQ8NGU1 263 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 MFSD3Q96ES6 412 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 HES6Q96HZ4 224 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 BIRC8Q96P09 236 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 SLC30A3Q99726 388 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 MACROD1Q9BQ69 325 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 PLCD4Q9BRC7 762 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 RBSNQ9H1K0 784 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 RIC8BQ9NVN3 520 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 SYBUQ9NX95 663 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 ANKRD10Q9NXR5 420 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 SPATA7Q9P0W8 599 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 SUCOQ9UBS9 1254 aaKnown RBP13.36□□□□□ -0.27
SLIRP-210ENST00000557431 TINAGQ9UJW2 476 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 MKL2Q9ULH7 1088 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 KLK4Q9Y5K2 254 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 POLQO75417 2590 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 AKAP9Q99996 3911 aa13.36□□□□□ -0.27
SLIRP-210ENST00000557431 DNAJC13O75165 2243 aa13.35□□□□□ -0.27
SLIRP-210ENST00000557431 OR5H15A6NDH6 313 aa13.35□□□□□ -0.27
SLIRP-210ENST00000557431 A8MUI8 341 aa13.35□□□□□ -0.27
SLIRP-210ENST00000557431 MIF4GDA9UHW6 222 aaKnown RBP13.35□□□□□ -0.27
SLIRP-210ENST00000557431 HAT1O14929 419 aa13.35□□□□□ -0.27
SLIRP-210ENST00000557431 MAN1A2O60476 641 aa13.35□□□□□ -0.27
SLIRP-210ENST00000557431 RPS3P23396 243 aaKnown RBP eCLIP13.35□□□□□ -0.275e-12■■■■■ 28.9
SLIRP-210ENST00000557431 RPA3P35244 121 aaPredicted RBP13.35□□□□□ -0.27
SLIRP-210ENST00000557431 SLC26A3P40879 764 aa13.35□□□□□ -0.27
SLIRP-210ENST00000557431 BASP1P80723 227 aaKnown RBP13.35□□□□□ -0.27
SLIRP-210ENST00000557431 KLHL38Q2WGJ6 581 aa13.35□□□□□ -0.27
SLIRP-210ENST00000557431 SEL1L2Q5TEA6 688 aa13.35□□□□□ -0.27
SLIRP-210ENST00000557431 MFSD4BQ5TF39 518 aa13.35□□□□□ -0.27
SLIRP-210ENST00000557431 ICE2Q659A1 982 aa13.35□□□□□ -0.27
SLIRP-210ENST00000557431 ARHGEF39Q8N4T4 335 aa13.35□□□□□ -0.27
SLIRP-210ENST00000557431 LURAP1Q96LR2 239 aa13.35□□□□□ -0.27
SLIRP-210ENST00000557431 FOPNLQ96NB1 174 aa13.35□□□□□ -0.27
SLIRP-210ENST00000557431 PKP4Q99569 1192 aa13.35□□□□□ -0.27
SLIRP-210ENST00000557431 ZNF407Q9C0G0 2248 aa13.35□□□□□ -0.27
SLIRP-210ENST00000557431 TCRBV7S3A2A0A539 114 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 FAM227AF5H4B4 570 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 VPS26AO75436 327 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 VAPBO95292 243 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 MATN4O95460 622 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 ANXA5P08758 320 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 ERGP11308 486 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 STIP1P31948 543 aaKnown RBP13.34□□□□□ -0.27
SLIRP-210ENST00000557431 CCNFP41002 786 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 KRTAP10-9P60411 292 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 CUL1Q13616 776 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 GBX1Q14549 363 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 ZXDCQ2QGD7 858 aaPredicted RBP13.34□□□□□ -0.27
SLIRP-210ENST00000557431 ABHD17BQ5VST6 288 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 ZNF425Q6IV72 752 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 BNC2Q6ZN30 1099 aaPredicted RBP13.34□□□□□ -0.27
SLIRP-210ENST00000557431 GDF7Q7Z4P5 450 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 GAS2L3Q86XJ1 694 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 SLC13A5Q86YT5 568 aaPredicted RBP13.34□□□□□ -0.27
SLIRP-210ENST00000557431 TMEM139Q8IV31 216 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 SYCE1Q8N0S2 351 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 BEST3Q8N1M1 668 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 CCDC89Q8N998 374 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 OR9A4Q8NGU2 314 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 LPGAT1Q92604 370 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 CALR3Q96L12 384 aaKnown RBP13.34□□□□□ -0.27
SLIRP-210ENST00000557431 IMMP1LQ96LU5 166 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 SIGLEC12Q96PQ1 595 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 OR2A5Q96R48 311 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 RBCK1Q9BYM8 510 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 ZNF700Q9H0M5 742 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 KLHL1Q9NR64 748 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 C14orf105Q9NVL8 296 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 HCN3Q9P1Z3 774 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 ABI3Q9P2A4 366 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 CDC14AQ9UNH5 594 aa13.34□□□□□ -0.27
SLIRP-210ENST00000557431 CCDC168Q8NDH2 2452 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 LOC102723996A0A087X1L8 192 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 A0A1W2PQ72 361 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 PRAMEF2O60811 474 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 SYF2O95926 243 aaKnown RBP13.33□□□□□ -0.28
SLIRP-210ENST00000557431 C8orf89P0DMQ9 161 aa13.33□□□□□ -0.28
SLIRP-210ENST00000557431 COX6B1P14854 86 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms