RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 GRIA3P42263 894 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 CSE1LP55060 971 aaKnown RBP10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 ADARP55265 1226 aaKnown RBP10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 HSPA14Q0VDF9 509 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 GRM7Q14831 915 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 ZNF169Q14929 603 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 TYSND1Q2T9J0 566 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 ZC3H12BQ5HYM0 836 aaKnown RBP10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 TCTE1Q5JU00 501 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 SDCCAG8Q86SQ7 713 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 CCDC25Q86WR0 208 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 CILP2Q8IUL8 1156 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 ANKMY2Q8IV38 441 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 DCUN1D3Q8IWE4 304 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 CNTN4Q8IWV2 1026 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 PALM2Q8IXS6 379 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 SLC34A3Q8N130 599 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 C2orf73Q8N5S3 287 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 GABPB2Q8TAK5 448 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 GSDMBQ8TAX9 411 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 DNAJB14Q8TBM8 379 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 CALML6Q8TD86 181 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 SLC22A18Q96BI1 424 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 SLX1AQ9BQ83 275 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 LHPPQ9H008 270 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 SOX17Q9H6I2 414 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 SEMA3GQ9NS98 782 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 C20orf96Q9NUD7 363 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 IRAK4Q9NWZ3 460 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 MARCH4Q9P2E8 410 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 CIDEBQ9UHD4 219 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 NXT1Q9UKK6 140 aaKnown RBP10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 NFU1Q9UMS0 254 aa10.24□□□□□ -0.77
HNRNPC-230ENST00000557201 A0A1W2PPV9 198 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 TARM1B6A8C7 271 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 GOLGA8KD6RF30 607 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 GOLGA8TH3BQL2 631 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 PFDN6O15212 129 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 SRPX2O60687 465 aaPredicted RBP10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 KLHL18O94889 574 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 FKBP9O95302 570 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 TUBBP07437 444 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 STSP08842 583 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 PRF1P14222 555 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 OR1D4P47884 311 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 THOC5Q13769 683 aaKnown RBP10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 SLMAPQ14BN4 828 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 ZRSR2Q15696 482 aaKnown RBP10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 TUBB8Q3ZCM7 444 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 HSP90AA5PQ58FG0 334 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 RNF187Q5TA31 235 aaPredicted RBP10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 ATG9BQ674R7 924 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 ZNF324BQ6AW86 544 aaPredicted RBP10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 RPUSD3Q6P087 351 aaKnown RBP10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 WDR93Q6P2C0 686 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 SHISA6Q6ZSJ9 500 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 KIAA0408Q6ZU52 694 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 C3orf62Q6ZUJ4 267 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 GALNT7Q86SF2 657 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 TAX1BP1Q86VP1 789 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 PARP9Q8IXQ6 854 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 HMGCLL1Q8TB92 370 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 ASZ1Q8WWH4 475 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 ZUFSPQ96AP4 578 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 CERS2Q96G23 380 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 CFAP36Q96G28 342 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 LMF1Q96S06 567 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 SELENOSQ9BQE4 189 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 FAM167BQ9BTA0 163 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 RRAGDQ9NQL2 400 aaPredicted RBP10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 INTS7Q9NVH2 962 aaKnown RBP10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 IL1RAPL1Q9NZN1 696 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 VPS9D1Q9Y2B5 631 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 MDC1Q14676 2089 aaKnown RBP10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 LRBAP50851 2863 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 CENPEQ02224 2701 aa10.23□□□□□ -0.77
HNRNPC-230ENST00000557201 IGLV3-12A0A075B6K2 115 aa10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 A0A1W2PQ72 361 aa10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 TCRBV9S1A1TA0A576 114 aa10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 F8W8V4 182 aa10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 PRMT5O14744 637 aaPredicted RBP10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 NRP2O60462 931 aa10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 RPN2P04844 631 aa10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 APOA4P06727 396 aa10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 ERVK-10P10266 1014 aa10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 SOX11P35716 441 aa10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 GPX6P59796 221 aa10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 KLC1Q07866 573 aa10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 CDC16Q13042 620 aa10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 MFAP5Q13361 173 aa10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 TLR1Q15399 786 aa10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 SF1Q15637 639 aaKnown RBP10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 ERCC6LQ2NKX8 1250 aa10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 CCSMST1Q4G0I0 132 aa10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 WASHC2DQ5SRD0 308 aa10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 ZNF470Q6ECI4 717 aa10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 FRMPD2BQ6IN97 320 aa10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 TRMT10BQ6PF06 316 aaKnown RBP10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 ISLR2Q6UXK2 745 aa10.22□□□□□ -0.77
HNRNPC-230ENST00000557201 RNF44Q7L0R7 432 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms