RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 SPATC1LQ9H0A9 340 aa4.63□□□□□ -1.67
ATXN3-246ENST00000557030 C10orf88Q9H8K7 445 aa4.63□□□□□ -1.67
ATXN3-246ENST00000557030 MOV10Q9HCE1 1003 aaKnown RBP4.63□□□□□ -1.67
ATXN3-246ENST00000557030 PRDM8Q9NQV8 689 aa4.63□□□□□ -1.67
ATXN3-246ENST00000557030 EIF2B3Q9NR50 452 aaKnown RBP4.63□□□□□ -1.67
ATXN3-246ENST00000557030 NSMCE4AQ9NXX6 385 aa4.63□□□□□ -1.67
ATXN3-246ENST00000557030 CLIC5Q9NZA1 410 aa4.63□□□□□ -1.67
ATXN3-246ENST00000557030 EPS15L1Q9UBC2 864 aa4.63□□□□□ -1.67
ATXN3-246ENST00000557030 COPG2Q9UBF2 871 aa4.63□□□□□ -1.67
ATXN3-246ENST00000557030 CPSF3Q9UKF6 684 aaKnown RBP4.63□□□□□ -1.67
ATXN3-246ENST00000557030 AP4B1Q9Y6B7 739 aa4.63□□□□□ -1.67
ATXN3-246ENST00000557030 PTPRFP10586 1907 aa4.63□□□□□ -1.67
ATXN3-246ENST00000557030 OTOFQ9HC10 1997 aa4.63□□□□□ -1.67
ATXN3-246ENST00000557030 DICER1Q9UPY3 1922 aaKnown RBP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 IGKV6-21A0A0C4DH24 114 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 A0A1B0GVG6 124 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 ZNF701M0R085 212 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 AP3B1O00203 1094 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 CYB561D2O14569 222 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 VILLO15195 856 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 DCXO43602 365 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 TIMM44O43615 452 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 ITM2AO43736 263 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 UGDHO60701 494 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 AVILO75366 819 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 PIAS1O75925 651 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 BCAS2O75934 225 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 ACTL6BO94805 426 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 STAMBPO95630 424 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 GSRP00390 522 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 TFAP2AP05549 437 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 PYGLP06737 847 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 POLBP06746 335 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 HOXC6P09630 235 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 RFPL3SP0C7P2 107 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 AKR1A1P14550 325 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 PSMC3P17980 439 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 ME2P23368 584 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 PIK3R1P27986 724 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 TYK2P29597 1187 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 SDC4P31431 198 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 GRK5P34947 590 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 GP5P40197 560 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 TNFSF9P41273 254 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 GPD2P43304 727 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 MAGEA12P43365 314 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 PTPN9P43378 593 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 SOX2P48431 317 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 POLD2P49005 469 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 ACADVLP49748 655 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 SLC12A2P55011 1212 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 CSE1LP55060 971 aaKnown RBP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 ADARP55265 1226 aaKnown RBP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 NUP107P57740 925 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 LINC00205P59089 165 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 RPL15P61313 204 aaKnown RBP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 SHC2P98077 582 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 PDE1CQ14123 709 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 MAPRE2Q15555 327 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 DPYSL2Q16555 572 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 LRRC36Q1X8D7 754 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 LEXMQ3ZCV2 418 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 NADK2Q4G0N4 442 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 SPANXN3Q5MJ09 141 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 LPCAT4Q643R3 524 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 OR6B2Q6IFH4 312 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 LRRC8BQ6P9F7 803 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 KLHL17Q6TDP4 642 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 EPGNQ6UW88 154 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 ZCCHC23Q6ZST2 131 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 MOB2Q70IA6 237 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 ZNF410Q86VK4 478 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 HPS6Q86YV9 775 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 ERI1Q8IV48 349 aaKnown RBP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 C10orf107Q8IVU9 208 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 RNF168Q8IYW5 571 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 PGAM4Q8N0Y7 254 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 CPSF7Q8N684 471 aaKnown RBP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 PQLC3Q8N755 202 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 EMC1Q8N766 993 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 HM13Q8TCT9 377 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 TFB1MQ8WVM0 346 aaKnown RBP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 PRPF31Q8WWY3 499 aaKnown RBP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 RXFP2Q8WXD0 754 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 SEPT1Q8WYJ6 367 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 RSC1A1Q92681 617 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 TRIM63Q969Q1 353 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 CCDC124Q96CT7 223 aaKnown RBP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 ZFYVE19Q96K21 471 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 SPATA13Q96N96 652 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 GCNAQ96QF7 691 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 PEBP4Q96S96 227 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 SORT1Q99523 831 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 OSBPL11Q9BXB4 747 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 MRPL1Q9BYD6 325 aaKnown RBP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 NUF2Q9BZD4 464 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 C20orf27Q9GZN8 174 aa4.62□□□□□ -1.67
ATXN3-246ENST00000557030 ILKAPQ9H0C8 392 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 RBM38Q9H0Z9 239 aaKnown RBP4.62□□□□□ -1.67
ATXN3-246ENST00000557030 PDZD7Q9H5P4 517 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms