RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 AMD1P17707 334 aa13.3□□□□□ -0.28
EFCAB11-212ENST00000556639 CSNK1EP49674 416 aaKnown RBP13.3□□□□□ -0.28
EFCAB11-212ENST00000556639 DGKQP52824 942 aa13.3□□□□□ -0.28
EFCAB11-212ENST00000556639 USP39Q53GS9 565 aaKnown RBP13.3□□□□□ -0.28
EFCAB11-212ENST00000556639 CYB5D1Q6P9G0 228 aa13.3□□□□□ -0.28
EFCAB11-212ENST00000556639 IYDQ6PHW0 289 aa13.3□□□□□ -0.28
EFCAB11-212ENST00000556639 PARGQ86W56 976 aa13.3□□□□□ -0.28
EFCAB11-212ENST00000556639 ULK2Q8IYT8 1036 aa13.3□□□□□ -0.28
EFCAB11-212ENST00000556639 RNF148Q8N7C7 305 aa13.3□□□□□ -0.28
EFCAB11-212ENST00000556639 MFSD2AQ8NA29 543 aa13.3□□□□□ -0.28
EFCAB11-212ENST00000556639 CXorf40BQ96DE9 158 aa13.3□□□□□ -0.28
EFCAB11-212ENST00000556639 TRIM8Q9BZR9 551 aa13.3□□□□□ -0.28
EFCAB11-212ENST00000556639 DENND2DQ9H6A0 471 aaPredicted RBP13.3□□□□□ -0.28
EFCAB11-212ENST00000556639 EFCAB1Q9HAE3 211 aa13.3□□□□□ -0.28
EFCAB11-212ENST00000556639 COLEC10Q9Y6Z7 277 aa13.3□□□□□ -0.28
EFCAB11-212ENST00000556639 ZDBF2Q9HCK1 2354 aa13.3□□□□□ -0.28
EFCAB11-212ENST00000556639 THADAQ6YHU6 1953 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 TLR4O00206 839 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 BTN3A3O00478 584 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 PRICKLE3O43900 615 aaPredicted RBP13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 STATHP02808 62 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 CCND1P24385 295 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 MSX2P35548 267 aaPredicted RBP13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 HSD17B2P37059 387 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 CYP4F2P78329 520 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 TBL3Q12788 808 aaKnown RBP13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 ART3Q13508 389 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 RBBP5Q15291 538 aaKnown RBP13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 DNAL1Q4LDG9 190 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 PAGE3Q5JUK9 113 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 ICE2Q659A1 982 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 LAS2Q8IYD9 372 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 NAGSQ8N159 534 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 FBXL6Q8N531 539 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 ANKRD53Q8N9V6 530 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 GPR156Q8NFN8 814 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 LCN9Q8WX39 176 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 GFM2Q969S9 779 aaKnown RBP13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 SPDL1Q96EA4 605 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 CMTM7Q96FZ5 175 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 TSSK3Q96PN8 268 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 HAUS8Q9BT25 410 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 SLC25A23Q9BV35 468 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 OR51B5Q9H339 312 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 KIR3DX1Q9H7L2 352 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 SLAMF8Q9P0V8 285 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 VPS29Q9UBQ0 182 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 APOBEC3BQ9UH17 382 aaKnown RBP13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 SLC7A8Q9UHI5 535 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 EIF3LQ9Y262 564 aaKnown RBP13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 MRASO14807 208 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 LCMT2O60294 686 aaKnown RBP13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 LRATO95237 230 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 TBX6O95947 436 aaPredicted RBP13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 NUDT1P36639 197 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 POLR2JP52435 117 aaKnown RBP13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 RACK1P63244 317 aaKnown RBP13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 PLIN5Q00G26 463 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 COL9A2Q14055 689 aaPredicted RBP13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 GPR18Q14330 331 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 TIGD2Q4W5G0 525 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 TMIGD1Q6UXZ0 262 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 HPS6Q86YV9 775 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 SCUBE1Q8IWY4 988 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 SPACA7Q96KW9 195 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 EFCAB11Q9BUY7 163 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 EHD1Q9H4M9 534 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 SYNPO2LQ9H987 977 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 WDR41Q9HAD4 459 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 ZIM2Q9NZV7 527 aa13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 GMPR2Q9P2T1 348 aaKnown RBP13.29□□□□□ -0.28
EFCAB11-212ENST00000556639 SERTM1A2A2V5 107 aa13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 B3GALT4O96024 378 aa13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 GBAP04062 536 aa13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 SDC1P18827 310 aa13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 PRDX1Q06830 199 aaKnown RBP13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 SIGLEC14Q08ET2 396 aa13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 STX5Q13190 355 aa13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 RCAN2Q14206 197 aa13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 MAPRE2Q15555 327 aa13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 NOXRED1Q6NXP6 359 aa13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 AMIGO1Q86WK6 493 aa13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 FAM46DQ8NEK8 389 aa13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 SLC37A2Q8TED4 501 aa13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 MAGEB10Q96LZ2 347 aaPredicted RBP13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 CDRT15Q96T59 188 aa13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 SORBS1Q9BX66 1292 aaKnown RBP13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 GSDMCQ9BYG8 508 aa13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 SLC6A20Q9NP91 592 aa13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 HEBP2Q9Y5Z4 205 aa13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 NCOR1O75376 2440 aa13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 SDC3O75056 442 aa13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 ENTPD5O75356 428 aa13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 PRPH2P23942 346 aa13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 MRPL19P49406 292 aaKnown RBP13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 CSNK1G2P78368 415 aa13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 RAE1P78406 368 aaKnown RBP13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 CSTF3Q12996 717 aaKnown RBP13.28□□□□□ -0.28
EFCAB11-212ENST00000556639 CAPRIN1Q14444 709 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms