RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 PTPRDP23468 1912 aa16.54■□□□□ 0.24
PPP4R3A-208ENST00000555462 TPST2O60704 377 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 AKR1A1P14550 325 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 GJA1P17302 382 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 KDELR2P33947 212 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 CSKP41240 450 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 MRPS15P82914 257 aaKnown RBP16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 DOC2BQ14184 412 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 LEXMQ3ZCV2 418 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 NEK5Q6P3R8 708 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 SCAIQ8N9R8 606 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 ST13P5Q8NFI4 369 aaPredicted RBP16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 APH1BQ8WW43 257 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 AUTS2Q8WXX7 1259 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 NIPSNAP1Q9BPW8 284 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 PALMDQ9NP74 551 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 C8orf4Q9NR00 106 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 PLSCR3Q9NRY6 295 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 UGT2A1Q9Y4X1 527 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 PCDH7O60245 1069 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 RFPL2O75678 378 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 VNN2O95498 520 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 HPRP00739 348 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 CSF2P04141 144 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 CCDC159P0C7I6 412 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 BPIP17213 487 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 HOXB8P17481 243 aaPredicted RBP16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 SSTR4P31391 388 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 HNF1BP35680 557 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 EIF2DP41214 584 aaKnown RBP16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 CACNG1Q06432 222 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 NFATC2Q13469 925 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 AGAP7PQ5VUJ5 663 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 METTL4Q8N3J2 472 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 DUSP21Q9H596 190 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 CR2P20023 1033 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 S100A5P33763 92 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 HTR7P34969 479 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 PTGER1P34995 402 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 TGFBR2P37173 567 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 MEF2AQ02078 507 aaPredicted RBP16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 UBE3AQ05086 875 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 CHIT1Q13231 466 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 CDH18Q13634 790 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 PCBP2Q15366 365 aaKnown RBP eCLIP16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 LRIT3Q3SXY7 679 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 ARMCX4Q5H9R4 360 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 KIAA1614Q5VZ46 1190 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 SHQ1Q6PI26 577 aaKnown RBP16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 CYP2U1Q7Z449 544 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 S100ZQ8WXG8 99 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 MAGEH1Q9H213 219 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 TIGARQ9NQ88 270 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 CTPS2Q9NRF8 586 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 ANKMY1Q9P2S6 941 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 DNMT3LQ9UJW3 386 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 CHD7Q9P2D1 2997 aa16.53■□□□□ 0.24
PPP4R3A-208ENST00000555462 GNG14A0A1W2PPG7 69 aa16.52■□□□□ 0.24
PPP4R3A-208ENST00000555462 KDELR3O43731 214 aa16.52■□□□□ 0.24
PPP4R3A-208ENST00000555462 KRT6AP02538 564 aa16.52■□□□□ 0.24
PPP4R3A-208ENST00000555462 KRT6BP04259 564 aa16.52■□□□□ 0.24
PPP4R3A-208ENST00000555462 ADRA2AP08913 450 aa16.52■□□□□ 0.24
PPP4R3A-208ENST00000555462 EPORP19235 508 aa16.52■□□□□ 0.24
PPP4R3A-208ENST00000555462 SDHBP21912 280 aa16.52■□□□□ 0.24
PPP4R3A-208ENST00000555462 GJA8P48165 433 aa16.52■□□□□ 0.24
PPP4R3A-208ENST00000555462 PPP3CCP48454 512 aa16.52■□□□□ 0.24
PPP4R3A-208ENST00000555462 KRT6CP48668 564 aa16.52■□□□□ 0.24
PPP4R3A-208ENST00000555462 PPP5CP53041 499 aa16.52■□□□□ 0.24
PPP4R3A-208ENST00000555462 NAGSQ8N159 534 aa16.52■□□□□ 0.24
PPP4R3A-208ENST00000555462 SETD9Q8NE22 299 aa16.52■□□□□ 0.24
PPP4R3A-208ENST00000555462 TET1Q8NFU7 2136 aa16.52■□□□□ 0.24
PPP4R3A-208ENST00000555462 SCAMP4Q969E2 229 aa16.52■□□□□ 0.24
PPP4R3A-208ENST00000555462 CEP19Q96LK0 163 aa16.52■□□□□ 0.24
PPP4R3A-208ENST00000555462 SH3GL1Q99961 368 aa16.52■□□□□ 0.24
PPP4R3A-208ENST00000555462 CNPPD1Q9BV87 410 aa16.52■□□□□ 0.24
PPP4R3A-208ENST00000555462 SMG9Q9H0W8 520 aaKnown RBP16.52■□□□□ 0.24
PPP4R3A-208ENST00000555462 B3GNT3Q9Y2A9 372 aa16.52■□□□□ 0.24
PPP4R3A-208ENST00000555462 DOCK6Q96HP0 2047 aa16.52■□□□□ 0.24
PPP4R3A-208ENST00000555462 TTC36A6NLP5 189 aa16.52■□□□□ 0.23
PPP4R3A-208ENST00000555462 H3BNC9 293 aa16.52■□□□□ 0.23
PPP4R3A-208ENST00000555462 UPK1BO75841 260 aa16.52■□□□□ 0.23
PPP4R3A-208ENST00000555462 KCNK5O95279 499 aa16.52■□□□□ 0.23
PPP4R3A-208ENST00000555462 PTNP21246 168 aa16.52■□□□□ 0.23
PPP4R3A-208ENST00000555462 MAPKAPK2P49137 400 aa16.52■□□□□ 0.23
PPP4R3A-208ENST00000555462 ST3GAL4Q11206 333 aa16.52■□□□□ 0.23
PPP4R3A-208ENST00000555462 TOP3AQ13472 1001 aaPredicted RBP16.52■□□□□ 0.23
PPP4R3A-208ENST00000555462 CCSMST1Q4G0I0 132 aa16.52■□□□□ 0.23
PPP4R3A-208ENST00000555462 MORN1Q5T089 497 aa16.52■□□□□ 0.23
PPP4R3A-208ENST00000555462 GDPD3Q7L5L3 318 aa16.52■□□□□ 0.23
PPP4R3A-208ENST00000555462 SNX20Q7Z614 316 aa16.52■□□□□ 0.23
PPP4R3A-208ENST00000555462 MRPL10Q7Z7H8 261 aaKnown RBP16.52■□□□□ 0.23
PPP4R3A-208ENST00000555462 CYP4Z2PQ8N1L4 340 aa16.52■□□□□ 0.23
PPP4R3A-208ENST00000555462 GPR26Q8NDV2 337 aa16.52■□□□□ 0.23
PPP4R3A-208ENST00000555462 OTUB1Q96FW1 271 aaPredicted RBP16.52■□□□□ 0.23
PPP4R3A-208ENST00000555462 P2RY12Q9H244 342 aa16.52■□□□□ 0.23
PPP4R3A-208ENST00000555462 IL1RAPQ9NPH3 570 aa16.52■□□□□ 0.23
PPP4R3A-208ENST00000555462 FZD4Q9ULV1 537 aa16.52■□□□□ 0.23
PPP4R3A-208ENST00000555462 MAP4K5Q9Y4K4 846 aa16.52■□□□□ 0.23
PPP4R3A-208ENST00000555462 SLC38A8A6NNN8 435 aa16.51■□□□□ 0.23
PPP4R3A-208ENST00000555462 DSCR3O14972 297 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms