RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 RNF44Q7L0R7 432 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 GOLGA7Q7Z5G4 137 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 C10orf107Q8IVU9 208 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 TEX9Q8N6V9 391 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 CCDC63Q8NA47 563 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 OR6Y1Q8NGX8 325 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 ZNF483Q8TF39 744 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-219ENST00000555323 THAP11Q96EK4 314 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 PRR11Q96HE9 360 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-219ENST00000555323 ZNF285Q96NJ3 590 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 TMEM237Q96Q45 408 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 NTMT1Q9BV86 223 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 NRSN2Q9GZP1 204 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 PITHD1Q9GZP4 211 aaPredicted RBP12.17□□□□□ -0.46
SYNE2-219ENST00000555323 NT5DC2Q9H857 520 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 KCNK9Q9NPC2 374 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 ABCF3Q9NUQ8 709 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 OCIAD1Q9NX40 245 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 KLHL20Q9Y2M5 609 aa12.17□□□□□ -0.46
SYNE2-219ENST00000555323 TMEM120BA0PK00 339 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 E7EQ34 232 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 H3BMH7 237 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 OR7A17O14581 309 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 PLD2O14939 933 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 CLGNO14967 610 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 BIRC5O15392 142 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 SUPT7LO94864 414 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 BPGMP07738 259 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 FGF5P12034 268 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 CDH1P12830 882 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 CCL4P13236 92 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 EZRP15311 586 aaKnown RBP12.16□□□□□ -0.46
SYNE2-219ENST00000555323 CXCR2P25025 360 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 ALDH3A1P30838 453 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 MLLT3P42568 568 aaPredicted RBP12.16□□□□□ -0.46
SYNE2-219ENST00000555323 ARL4DP49703 201 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 SH3BP2P78314 561 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 CLCQ05315 142 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 RTP5Q14D33 572 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 LIPJQ5W064 366 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 CYB5D1Q6P9G0 228 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 MCATQ8IVS2 390 aaKnown RBP12.16□□□□□ -0.46
SYNE2-219ENST00000555323 OR8K5Q8NH50 307 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 ZNF501Q96CX3 271 aaPredicted RBP12.16□□□□□ -0.46
SYNE2-219ENST00000555323 FCRL4Q96PJ5 515 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 OR2A5Q96R48 311 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 KLHL25Q9H0H3 589 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 IPPKQ9H8X2 491 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 SOHLH2Q9NX45 425 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 PLCL2Q9UPR0 1127 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 LOXL2Q9Y4K0 774 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 NEUROG3Q9Y4Z2 214 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 ANGPTL3Q9Y5C1 460 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 PCDHGA3Q9Y5H0 932 aa12.16□□□□□ -0.46
SYNE2-219ENST00000555323 TRBC2A0A5B9 178 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 EFCAB7A8K855 629 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 HCRTR1O43613 425 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 LCMT2O60294 686 aaKnown RBP12.15□□□□□ -0.46
SYNE2-219ENST00000555323 NRP2O60462 931 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 H2AFYO75367 372 aaKnown RBP12.15□□□□□ -0.46
SYNE2-219ENST00000555323 EBLN1P0CF75 366 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 GRK3P35626 688 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 SERPINB4P48594 390 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 NAGLUP54802 743 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 CDH13P55290 713 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 WDR4P57081 412 aaKnown RBP12.15□□□□□ -0.46
SYNE2-219ENST00000555323 RPS15AP62244 130 aaKnown RBP12.15□□□□□ -0.46
SYNE2-219ENST00000555323 IRF8Q02556 426 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 GALNT1Q10472 559 aaPredicted RBP12.15□□□□□ -0.46
SYNE2-219ENST00000555323 ASPHQ12797 758 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 FOXC1Q12948 553 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 CHIT1Q13231 466 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 LAPTM5Q13571 262 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 DOC2AQ14183 400 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 KCNAB1Q14722 419 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 TMPRSS11BQ86T26 416 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 MARCH9Q86YJ5 346 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 SNX31Q8N9S9 440 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 L3MBTL4Q8NA19 623 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 TM4SF19Q96DZ7 209 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 PTCD3Q96EY7 689 aaKnown RBP12.15□□□□□ -0.46
SYNE2-219ENST00000555323 SEC16BQ96JE7 1060 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 CNDP1Q96KN2 507 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 NSUN5Q96P11 429 aaKnown RBP12.15□□□□□ -0.46
SYNE2-219ENST00000555323 OR6C1Q96RD1 312 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 ZFYVE21Q9BQ24 234 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 AIF1LQ9BQI0 150 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 EFCAB11Q9BUY7 163 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 SCNM1Q9BWG6 230 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 GATA5Q9BWX5 397 aaPredicted RBP12.15□□□□□ -0.46
SYNE2-219ENST00000555323 GSTO2Q9H4Y5 243 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 NOL11Q9H8H0 719 aaKnown RBP12.15□□□□□ -0.46
SYNE2-219ENST00000555323 POLR1BQ9H9Y6 1135 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 MED4Q9NPJ6 270 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 FGF21Q9NSA1 209 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 GEMIN8Q9NWZ8 242 aaKnown RBP12.15□□□□□ -0.46
SYNE2-219ENST00000555323 KLK13Q9UKR3 277 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 SATB2Q9UPW6 733 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 MSRB2Q9Y3D2 182 aa12.15□□□□□ -0.46
SYNE2-219ENST00000555323 TSC22D4Q9Y3Q8 395 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms