RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 TMEM184CQ9NVA4 438 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 CUEDC1Q9NWM3 386 aaPredicted RBP11.58□□□□□ -0.56
SRP54-206ENST00000555317 POLHQ9Y253 713 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 DYRK1BQ9Y463 629 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 OARD1Q9Y530 152 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 SMG1Q96Q15 3661 aaKnown RBP11.58□□□□□ -0.56
SRP54-206ENST00000555317 BOD1L1Q8NFC6 3051 aa11.58□□□□□ -0.56
SRP54-206ENST00000555317 COL6A6A6NMZ7 2263 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 CFAP46Q8IYW2 2715 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 A0A087WUV0 522 aaPredicted RBP11.57□□□□□ -0.56
SRP54-206ENST00000555317 LOC105369274A0A096LPK9 316 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 IGKV1-8A0A0C4DH67 115 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 LOC102723532A0A0G2JNH3 316 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 HYKKA2RU49 373 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 H0YGG7 62 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 H3BMH7 237 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 TK2O00142 265 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 TERTO14746 1132 aaKnown RBP11.57□□□□□ -0.56
SRP54-206ENST00000555317 NRP2O60462 931 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 CDH1P12830 882 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 FOLR3P41439 243 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 SERPINB8P50452 374 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 CCR8P51685 355 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 ARF3P61204 181 aaPredicted RBP11.57□□□□□ -0.56
SRP54-206ENST00000555317 RPS15AP62244 130 aaKnown RBP11.57□□□□□ -0.56
SRP54-206ENST00000555317 CDKL1Q00532 357 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 CSHL1Q14406 222 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 SLC9A5Q14940 896 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 PPP1R3AQ16821 1122 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 MUM1Q2TAK8 710 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 TEX35Q5T0J7 233 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 ATP1A1-AS1Q5TC04 95 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 MROH9Q5TGP6 573 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 FRMPD2BQ6IN97 320 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 ZNF425Q6IV72 752 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 ZNF517Q6ZMY9 492 aaPredicted RBP11.57□□□□□ -0.56
SRP54-206ENST00000555317 CCDC91Q7Z6B0 441 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 GPSM1Q86YR5 675 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 OR4N4Q8N0Y3 316 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 TCAIMQ8N3R3 496 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 SPATA6LQ8N4H0 392 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 TTC9Q92623 222 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 PYCR2Q96C36 320 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 SGPP1Q9BX95 441 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 CNOT10Q9H9A5 744 aaKnown RBP11.57□□□□□ -0.56
SRP54-206ENST00000555317 NMRAL1Q9HBL8 299 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 WWOXQ9NZC7 414 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 TLK1Q9UKI8 766 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 TCFL5Q9UL49 500 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 RNF112Q9ULX5 631 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 MAN2B2Q9Y2E5 1009 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 CCDC88CQ9P219 2028 aa11.57□□□□□ -0.56
SRP54-206ENST00000555317 A0A087X1B8 175 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 FITM1A5D6W6 292 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 NCF1BA6NI72 391 aaPredicted RBP11.56□□□□□ -0.56
SRP54-206ENST00000555317 NCF1CA8MVU1 366 aaPredicted RBP11.56□□□□□ -0.56
SRP54-206ENST00000555317 PRPF4O43172 522 aaKnown RBP eCLIP11.56□□□□□ -0.56
SRP54-206ENST00000555317 RECKO95980 971 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 C1QAP02745 245 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 SFTPCP11686 197 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 NCF1P14598 390 aaPredicted RBP11.56□□□□□ -0.56
SRP54-206ENST00000555317 CD1DP15813 335 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 ECHS1P30084 290 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 MSH2P43246 934 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 RELAQ04206 551 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 BMPR2Q13873 1038 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 ZKSCAN8Q15776 578 aaPredicted RBP11.56□□□□□ -0.56
SRP54-206ENST00000555317 NDUFA9Q16795 377 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 UGT8Q16880 541 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 LCN10Q6JVE6 187 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 FBXO42Q6P3S6 717 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 KLC3Q6P597 504 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 CMC1Q7Z7K0 106 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 RAB43Q86YS6 212 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 PLD3Q8IV08 490 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 METTL27Q8N6F8 245 aaPredicted RBP11.56□□□□□ -0.56
SRP54-206ENST00000555317 OR56A3Q8NH54 315 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 APOBEC4Q8WW27 367 aaKnown RBP11.56□□□□□ -0.56
SRP54-206ENST00000555317 SLC5A11Q8WWX8 675 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 THAP4Q8WY91 577 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 EXT2Q93063 718 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 COL26A1Q96A83 441 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 THAP11Q96EK4 314 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 ZNF285Q96NJ3 590 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 RUFY1Q96T51 708 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 CD274Q9NZQ7 290 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 IKZF3Q9UKT9 509 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 CDC14AQ9UNH5 594 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 ACOT9Q9Y305 439 aa11.56□□□□□ -0.56
SRP54-206ENST00000555317 EXOC1LA0A1B0GW35 172 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 KRT38O76015 456 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 IPO13O94829 963 aaKnown RBP11.55□□□□□ -0.56
SRP54-206ENST00000555317 WDR47O94967 919 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 LTA4HP09960 611 aaKnown RBP11.55□□□□□ -0.56
SRP54-206ENST00000555317 FAM87AP0C7U9 286 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 SLC35E2BP0CK96 405 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 FBLP22087 321 aaKnown RBP11.55□□□□□ -0.56
SRP54-206ENST00000555317 TYK2P29597 1187 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 SLC26A3P40879 764 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 SERPINB9P50453 376 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms